Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL049844.2-201ENST00000604280 628 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 AC026741.1-201ENST00000605892 482 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-2O95096 AC008759.3-201ENST00000613300 508 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
NKX2-2O95096 AC093875.1-201ENST00000623688 504 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 CU639417.4-201ENST00000623928 207 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-2O95096 AC104964.3-201ENST00000606115 2860 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
NKX2-2O95096 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX2-2O95096 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-2O95096 AC092451.3-201ENST00000625067 1343 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 AC007342.5-201ENST00000571340 2142 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-2O95096 NXF4-202ENST00000416098 1465 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NKX2-2O95096 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NKX2-2O95096 AC004656.1-201ENST00000568479 4951 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-2O95096 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
NKX2-2O95096 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-2O95096 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-2O95096 AC097461.1-201ENST00000568928 2821 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-2O95096 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NKX2-2O95096 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NKX2-2O95096 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-2O95096 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-2O95096 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-2O95096 RNA5SP510-201ENST00000364697 99 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-2O95096 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.13□□□□□ -1.59
NKX2-2O95096 RNU4-31P-201ENST00000384211 141 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 MIR620-201ENST00000385232 95 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 MIR1282-201ENST00000408865 101 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 AC069282.1-201ENST00000411911 526 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX2-2O95096 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
NKX2-2O95096 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 MTND2P9-201ENST00000422293 931 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.13□□□□□ -1.59
NKX2-2O95096 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.13□□□□□ -1.59
NKX2-2O95096 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.13□□□□□ -1.59
NKX2-2O95096 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.13□□□□□ -1.59
NKX2-2O95096 OR6D1P-201ENST00000436165 939 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 AC002504.1-201ENST00000438281 691 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.13□□□□□ -1.59
NKX2-2O95096 AC073465.2-201ENST00000440938 498 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.13□□□□□ -1.59
NKX2-2O95096 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.13□□□□□ -1.59
NKX2-2O95096 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-2O95096 EEF1B2P6-201ENST00000445713 673 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 AC069540.1-201ENST00000446320 988 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-2O95096 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-2O95096 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-2O95096 FCF1P6-201ENST00000456841 595 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 RPS20P4-201ENST00000461659 355 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 AC128716.1-201ENST00000475129 166 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 RPL21P47-201ENST00000483696 477 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.13□□□□□ -1.59
NKX2-2O95096 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX2-2O95096 AC109481.1-201ENST00000509173 282 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 RNU6-1004P-201ENST00000516584 111 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
NKX2-2O95096 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX2-2O95096 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX2-2O95096 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NKX2-2O95096 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.13□□□□□ -1.59
NKX2-2O95096 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.13□□□□□ -1.59
NKX2-2O95096 AL049872.1-201ENST00000556323 322 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 AC122134.1-201ENST00000565664 1104 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.13□□□□□ -1.59
NKX2-2O95096 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX2-2O95096 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
NKX2-2O95096 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX2-2O95096 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.13□□□□□ -1.59
NKX2-2O95096 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.13□□□□□ -1.59
NKX2-2O95096 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX2-2O95096 BNIP3P35-201ENST00000604530 490 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 AC105148.1-201ENST00000604961 409 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 AC007786.3-201ENST00000615154 596 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX2-2O95096 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
NKX2-2O95096 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-2O95096 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
NKX2-2O95096 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-2O95096 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.13□□□□□ -1.59
NKX2-2O95096 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms