Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 RNA5SP339-201ENST00000390987 122 ntBASIC4.92□□□□□ -1.62
SCN2BO60939 AC211486.3-201ENST00000412694 621 ntBASIC4.92□□□□□ -1.62
SCN2BO60939 CDY17P-201ENST00000414121 1282 ntBASIC4.92□□□□□ -1.62
SCN2BO60939 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN2BO60939 AL161722.2-201ENST00000434731 981 ntBASIC4.92□□□□□ -1.62
SCN2BO60939 NPM1P48-201ENST00000436002 853 ntBASIC4.92□□□□□ -1.62
SCN2BO60939 CYCSP24-201ENST00000445119 316 ntBASIC4.92□□□□□ -1.62
SCN2BO60939 AC005412.2-201ENST00000492004 341 ntBASIC4.92□□□□□ -1.62
SCN2BO60939 RPEP1-201ENST00000504507 658 ntBASIC4.92□□□□□ -1.62
SCN2BO60939 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN2BO60939 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN2BO60939 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN2BO60939 HMGB1P40-201ENST00000525121 540 ntBASIC4.92□□□□□ -1.62
SCN2BO60939 AC126177.5-201ENST00000549599 178 ntBASIC4.92□□□□□ -1.62
SCN2BO60939 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN2BO60939 AC104695.2-201ENST00000605056 775 ntBASIC4.92□□□□□ -1.62
SCN2BO60939 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SCN2BO60939 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN2BO60939 AC126175.1-201ENST00000617041 758 ntBASIC4.92□□□□□ -1.62
SCN2BO60939 BX005214.3-202ENST00000619809 325 ntBASIC4.92□□□□□ -1.62
SCN2BO60939 AC026124.2-201ENST00000621847 656 ntBASIC4.92□□□□□ -1.62
SCN2BO60939 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN2BO60939 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN2BO60939 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
SCN2BO60939 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN2BO60939 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN2BO60939 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN2BO60939 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SCN2BO60939 AC092747.4-201ENST00000620519 1861 ntBASIC4.92□□□□□ -1.62
SCN2BO60939 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN2BO60939 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
SCN2BO60939 AL731566.1-201ENST00000620490 1937 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN2BO60939 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.91□□□□□ -1.62
SCN2BO60939 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCN2BO60939 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN2BO60939 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN2BO60939 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SCN2BO60939 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SCN2BO60939 AP000542.2-201ENST00000623199 6179 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN2BO60939 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN2BO60939 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SCN2BO60939 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCN2BO60939 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.91□□□□□ -1.62
SCN2BO60939 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.91□□□□□ -1.62
SCN2BO60939 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
SCN2BO60939 RNA5SP223-201ENST00000365174 120 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SCN2BO60939 AL390774.1-201ENST00000411924 246 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN2BO60939 AC104333.2-201ENST00000422630 192 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 AC106901.1-201ENST00000425086 698 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.91□□□□□ -1.62
SCN2BO60939 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.91□□□□□ -1.62
SCN2BO60939 GTF3AP5-201ENST00000442645 697 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 BTF3P6-201ENST00000448054 499 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 RPL7P45-201ENST00000455851 743 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 AC100832.1-201ENST00000471945 383 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 AC117394.1-201ENST00000477323 567 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 RN7SL273P-201ENST00000481561 299 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 RPL7P40-201ENST00000481703 745 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN2BO60939 AC097173.1-201ENST00000505862 819 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 RNU6-941P-201ENST00000516346 108 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN2BO60939 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.91□□□□□ -1.62
SCN2BO60939 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN2BO60939 DUX4L52-201ENST00000549363 777 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN2BO60939 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCN2BO60939 MIR3614-201ENST00000581261 86 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 SUGT1P3-202ENST00000604259 383 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN2BO60939 AP005432.2-201ENST00000608162 586 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 AL359513.1-201ENST00000614364 557 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 MIR8080-201ENST00000622224 89 ntBASIC4.91□□□□□ -1.62
SCN2BO60939 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCN2BO60939 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN2BO60939 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN2BO60939 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.91□□□□□ -1.62
SCN2BO60939 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN2BO60939 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN2BO60939 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN2BO60939 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCN2BO60939 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SCN2BO60939 THAP12P5-201ENST00000405864 2275 ntBASIC4.9□□□□□ -1.62
SCN2BO60939 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
SCN2BO60939 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SCN2BO60939 OR8V1P-201ENST00000395193 873 ntBASIC4.9□□□□□ -1.63
SCN2BO60939 AC233289.1-201ENST00000403700 508 ntBASIC4.9□□□□□ -1.63
SCN2BO60939 AC007738.1-201ENST00000413892 348 ntBASIC4.9□□□□□ -1.63
SCN2BO60939 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.9□□□□□ -1.63
SCN2BO60939 EI24P4-201ENST00000423683 1078 ntBASIC4.9□□□□□ -1.63
SCN2BO60939 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.9□□□□□ -1.63
SCN2BO60939 AL589765.3-201ENST00000446084 462 ntBASIC4.9□□□□□ -1.63
SCN2BO60939 RPS26P41-201ENST00000450370 284 ntBASIC4.9□□□□□ -1.63
SCN2BO60939 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.9□□□□□ -1.63
SCN2BO60939 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SCN2BO60939 AC104109.1-201ENST00000498563 436 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms