Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SLC28A1O00337 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SLC28A1O00337 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.09□□□□□ -1.6
SLC28A1O00337 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SLC28A1O00337 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC28A1O00337 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC28A1O00337 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC28A1O00337 AC006210.2-201ENST00000367074 1545 ntBASIC5.08□□□□□ -1.6
SLC28A1O00337 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC28A1O00337 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC28A1O00337 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC28A1O00337 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SLC28A1O00337 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC28A1O00337 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SLC28A1O00337 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC28A1O00337 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
SLC28A1O00337 AC017079.1-201ENST00000333650 415 ntBASIC5.08□□□□□ -1.6
SLC28A1O00337 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC28A1O00337 EI24P3-201ENST00000399046 1062 ntBASIC5.08□□□□□ -1.6
SLC28A1O00337 RNU2-18P-201ENST00000411224 162 ntBASIC5.08□□□□□ -1.6
SLC28A1O00337 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC28A1O00337 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC28A1O00337 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC28A1O00337 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC28A1O00337 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC28A1O00337 CLUHP1-201ENST00000435012 1190 ntBASIC5.08□□□□□ -1.6
SLC28A1O00337 ARL5AP3-201ENST00000439327 386 ntBASIC5.08□□□□□ -1.6
SLC28A1O00337 AC064862.4-201ENST00000442180 334 ntBASIC5.08□□□□□ -1.6
SLC28A1O00337 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC28A1O00337 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC28A1O00337 AC094085.1-201ENST00000468914 584 ntBASIC5.08□□□□□ -1.6
SLC28A1O00337 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC28A1O00337 AC074087.1-201ENST00000512059 724 ntBASIC5.08□□□□□ -1.6
SLC28A1O00337 AC006427.1-201ENST00000514359 712 ntBASIC5.08□□□□□ -1.6
SLC28A1O00337 SNORD46.2-201ENST00000516021 102 ntBASIC5.08□□□□□ -1.6
SLC28A1O00337 AC104997.1-201ENST00000519761 717 ntBASIC5.08□□□□□ -1.6
SLC28A1O00337 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC28A1O00337 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SLC28A1O00337 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC28A1O00337 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC28A1O00337 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC28A1O00337 BLZF2P-201ENST00000553776 1130 ntBASIC5.08□□□□□ -1.6
SLC28A1O00337 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC28A1O00337 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC28A1O00337 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC28A1O00337 AC245128.3-201ENST00000594721 748 ntBASIC5.08□□□□□ -1.6
SLC28A1O00337 AL133406.3-201ENST00000606817 541 ntBASIC5.08□□□□□ -1.6
SLC28A1O00337 AC000068.2-201ENST00000608816 460 ntBASIC5.08□□□□□ -1.6
SLC28A1O00337 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
SLC28A1O00337 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC28A1O00337 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SLC28A1O00337 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC28A1O00337 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC28A1O00337 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC28A1O00337 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SLC28A1O00337 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC28A1O00337 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.08□□□□□ -1.6
SLC28A1O00337 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SLC28A1O00337 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC28A1O00337 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC28A1O00337 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SLC28A1O00337 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC28A1O00337 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC28A1O00337 AC093591.2-201ENST00000565254 3843 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SLC28A1O00337 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC28A1O00337 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC28A1O00337 AL450345.1-202ENST00000605741 3881 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 MIR133B-201ENST00000362210 119 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 RNU6-1251P-201ENST00000364502 107 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC28A1O00337 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC28A1O00337 RNA5SP284-201ENST00000384547 118 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 MTND4LP13-201ENST00000425022 298 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC28A1O00337 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.07□□□□□ -1.6
SLC28A1O00337 TXNP2-201ENST00000443918 295 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC28A1O00337 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SLC28A1O00337 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC28A1O00337 RPS4XP12-201ENST00000461747 709 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 NDUFA5P5-201ENST00000468361 342 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 RN7SL273P-201ENST00000481561 299 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 NIFKP7-201ENST00000503365 834 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC28A1O00337 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC28A1O00337 HMGB1P40-201ENST00000525121 540 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 AC005363.1-201ENST00000530779 351 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 AL358913.1-201ENST00000554342 121 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC28A1O00337 MIR1273E-201ENST00000581165 102 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC28A1O00337 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.07□□□□□ -1.6
SLC28A1O00337 AL135786.2-201ENST00000608422 615 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SLC28A1O00337 AC020658.4-201ENST00000613987 684 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 AL133370.2-201ENST00000619934 439 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC28A1O00337 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SLC28A1O00337 AC074101.1-201ENST00000637861 241 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms