Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC022893.2-201ENST00000564832 3296 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 XIAPP3-201ENST00000312918 795 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 MIR513A2-201ENST00000385249 127 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 HSPA8P15-201ENST00000401676 786 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AL138878.1-201ENST00000405131 347 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC016739.1-201ENST00000405359 345 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 DHFRP2-201ENST00000414224 547 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC009303.1-201ENST00000426307 352 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 FECHP1-201ENST00000431896 1214 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 RPL12P46-201ENST00000436610 195 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 CHCHD4P5-201ENST00000436684 427 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 UBQLN1P1-207ENST00000441056 1169 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 PCNPP2-201ENST00000441651 455 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 COL11A2P1-205ENST00000441798 676 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AL354714.3-201ENST00000447284 493 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC022431.1-201ENST00000450941 438 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 BX842559.2-201ENST00000451418 605 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC002553.3-201ENST00000453002 341 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 RN7SL145P-201ENST00000469955 296 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC092865.4-201ENST00000477936 615 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 RN7SL570P-201ENST00000484405 292 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 RPL7P41-201ENST00000485823 957 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC073073.1-201ENST00000493920 463 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC092045.1-201ENST00000495716 1231 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 NIPA2P2-201ENST00000496376 1083 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 RN7SL558P-201ENST00000497468 299 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 RN7SL104P-201ENST00000498686 293 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC020593.1-201ENST00000507399 299 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 PTPN20-223ENST00000509900 693 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 PTPN20-228ENST00000513266 818 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 RN7SKP34-201ENST00000516142 244 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC107016.1-201ENST00000550463 337 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC084033.2-201ENST00000551532 967 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AL132640.2-202ENST00000559732 614 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AGGF1P8-201ENST00000562979 1000 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 FCGR1CP-201ENST00000579737 1127 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 SLC25A36P1-201ENST00000590111 465 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 CDC42EP3P1-201ENST00000601004 764 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AL121782.1-201ENST00000611242 413 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 CYP1D1P-201ENST00000416662 1433 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 MAPK10-373ENST00000641983 6772 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AL627171.1-201ENST00000618845 1308 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 CASC19-246ENST00000641625 1606 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 SELENOWP1-201ENST00000322792 252 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 SNORA62.2-201ENST00000364672 152 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AL357515.1-201ENST00000402967 542 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 RPA3-204ENST00000406109 434 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AL390316.1-201ENST00000406279 553 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AL512422.1-201ENST00000407033 553 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 RN7SKP216-201ENST00000411050 312 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms