Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 HSPE1P22-201ENST00000456856 327 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AC108161.1-201ENST00000461060 402 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 RN7SL189P-201ENST00000468631 289 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 RPSAP37-201ENST00000470913 821 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AC018797.1-201ENST00000510791 255 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 ENPP7P9-201ENST00000514456 627 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 WBP1LP3-201ENST00000523033 208 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AC011270.1-201ENST00000558606 583 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 CD24P2-201ENST00000565486 219 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 RN7SL708P-201ENST00000580952 299 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AC087283.1-201ENST00000604029 1074 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AC009597.2-201ENST00000604659 592 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AL162431.4-201ENST00000604674 411 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 MIR6071-201ENST00000616741 78 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AC111152.1-202ENST00000635848 339 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 RNA5SP433-201ENST00000364491 114 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 OR13C3-201ENST00000374781 1108 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AL390316.1-201ENST00000406279 553 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 RNA5SP198-201ENST00000410376 127 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AL354890.1-201ENST00000413730 346 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AL035422.1-201ENST00000414193 397 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AC096644.3-201ENST00000416788 338 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 TRGV7-201ENST00000427089 353 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 RPS26P2-201ENST00000440331 348 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 ARL4AP3-201ENST00000441452 574 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 RPL7AP61-201ENST00000443410 636 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 MTND6P32-201ENST00000457611 483 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 RPEP1-201ENST00000504507 658 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 HSD3BP3-201ENST00000514706 994 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 RNA5SP473-201ENST00000516402 125 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AC022882.1-201ENST00000532142 501 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 TOMM20P1-201ENST00000534518 427 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AC107958.1-201ENST00000556576 290 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 CYCSP40-201ENST00000575927 294 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 SNORD39.2-201ENST00000579995 76 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AC124856.1-201ENST00000600819 896 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AC091167.5-201ENST00000605689 894 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 MIR6809-201ENST00000612189 116 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AP001005.3-201ENST00000622049 129 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 AC009950.2-201ENST00000636548 183 ntBASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms