Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 SNORD65C-201ENST00000390962 71 ntBASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AL603865.2-201ENST00000401679 213 ntBASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 TUBB4BP6-201ENST00000437576 479 ntBASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 BMS1P10-201ENST00000443754 1120 ntBASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 RPL21P6-201ENST00000479171 504 ntBASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 RNA5SP303-201ENST00000516192 130 ntBASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AC083923.1-201ENST00000523708 376 ntBASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AC092121.1-201ENST00000569452 202 ntBASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AC055764.2-201ENST00000610089 670 ntBASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 uc_338.26-201ENST00000612659 160 ntBASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AL021918.2-201ENST00000613415 194 ntBASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AC091305.2-201ENST00000624049 1576 ntBASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AC139713.2-210ENST00000641741 992 ntBASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A3BPQ9Y5P4 AC027088.4-201ENST00000611559 1947 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 RNA5SP510-201ENST00000364697 99 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 RNA5SP211-201ENST00000365516 117 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 MIR1203-201ENST00000408812 85 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AC092745.2-202ENST00000411880 369 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 OR13Z1P-201ENST00000416141 834 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 MTCO2P23-201ENST00000425216 680 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AC099677.3-201ENST00000427081 395 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 PCBP2P1-201ENST00000437262 977 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 RRM2P4-201ENST00000441721 562 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AC073109.1-201ENST00000445066 978 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AL358794.1-201ENST00000445689 381 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AL122020.1-201ENST00000472287 459 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 snoU109.6-201ENST00000516831 118 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AC079064.1-201ENST00000528365 362 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 CYCSP41-201ENST00000616920 296 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 U6.48-201ENST00000618523 106 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 U6.107-201ENST00000637108 79 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 AC133552.1-201ENST00000569988 4007 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms