Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 SNORA17.1-201ENST00000362945 126 ntBASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 U3.36-201ENST00000408418 213 ntBASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 OR52E3P-201ENST00000452083 936 ntBASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 RPL7AP6-201ENST00000477943 801 ntBASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 OR4A46P-201ENST00000527255 933 ntBASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 AC006116.3-201ENST00000592968 361 ntBASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 AC090510.2-201ENST00000617465 629 ntBASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 AC118658.2-201ENST00000618697 459 ntBASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 AP003400.3-201ENST00000624904 346 ntBASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 TET1P1-201ENST00000426627 2301 ntBASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 HCFC2P1-201ENST00000392864 1592 ntBASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 RN7SKP126-201ENST00000411143 300 ntBASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 RN7SL329P-201ENST00000467740 299 ntBASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 AC091544.1-201ENST00000484702 348 ntBASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 AC112184.1-201ENST00000505179 312 ntBASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 AC087763.1-201ENST00000603391 286 ntBASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 TAS2R6P-201ENST00000605022 826 ntBASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 AC099654.6-201ENST00000636487 512 ntBASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 LINC01739-205ENST00000641890 573 ntBASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 AC011755.1-201ENST00000623763 2049 ntBASIC6.2□□□□□ -1.42
CLIP2Q9UDT6 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 RNU1-146P-201ENST00000364015 165 ntBASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 MIR600-201ENST00000385007 98 ntBASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 EI24P3-201ENST00000399046 1062 ntBASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 AC211486.3-201ENST00000412694 621 ntBASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 CBX1P3-201ENST00000413296 527 ntBASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 TCEA1P3-201ENST00000443005 880 ntBASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 CEACAMP7-201ENST00000444105 496 ntBASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 RN7SL826P-201ENST00000479724 288 ntBASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 RN7SKP66-201ENST00000516681 231 ntBASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 AC092709.1-201ENST00000521355 1045 ntBASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 AC134349.2-201ENST00000535136 910 ntBASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 AC024940.3-201ENST00000538551 316 ntBASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 RN7SL708P-201ENST00000580952 299 ntBASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 AC009163.6-201ENST00000612367 342 ntBASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 MIR6730-201ENST00000622213 67 ntBASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 CASC19-222ENST00000641321 1173 ntBASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLIP2Q9UDT6 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms