Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CHD7Q9P2D1 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CHD7Q9P2D1 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHD7Q9P2D1 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHD7Q9P2D1 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHD7Q9P2D1 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CHD7Q9P2D1 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHD7Q9P2D1 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.09□□□□□ -1.59
CHD7Q9P2D1 CYCSP19-201ENST00000411715 316 ntBASIC5.09□□□□□ -1.59
CHD7Q9P2D1 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.09□□□□□ -1.59
CHD7Q9P2D1 RN7SL176P-201ENST00000580352 264 ntBASIC5.09□□□□□ -1.59
CHD7Q9P2D1 AC022726.1-201ENST00000587475 207 ntBASIC5.09□□□□□ -1.59
CHD7Q9P2D1 AL139124.1-201ENST00000609123 421 ntBASIC5.09□□□□□ -1.59
CHD7Q9P2D1 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.09□□□□□ -1.59
CHD7Q9P2D1 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHD7Q9P2D1 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHD7Q9P2D1 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CHD7Q9P2D1 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.09□□□□□ -1.59
CHD7Q9P2D1 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHD7Q9P2D1 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CHD7Q9P2D1 RNU1-82P-201ENST00000390851 165 ntBASIC5.09□□□□□ -1.6
CHD7Q9P2D1 U3.32-201ENST00000408116 212 ntBASIC5.09□□□□□ -1.6
CHD7Q9P2D1 ACTR3P2-201ENST00000439585 1257 ntBASIC5.09□□□□□ -1.6
CHD7Q9P2D1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.09□□□□□ -1.6
CHD7Q9P2D1 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.09□□□□□ -1.6
CHD7Q9P2D1 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CHD7Q9P2D1 AC015795.1-201ENST00000513669 327 ntBASIC5.09□□□□□ -1.6
CHD7Q9P2D1 NPM1P6-201ENST00000521088 871 ntBASIC5.09□□□□□ -1.6
CHD7Q9P2D1 BUD31P1-201ENST00000521828 359 ntBASIC5.09□□□□□ -1.6
CHD7Q9P2D1 AC079064.1-201ENST00000528365 362 ntBASIC5.09□□□□□ -1.6
CHD7Q9P2D1 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.09□□□□□ -1.6
CHD7Q9P2D1 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
CHD7Q9P2D1 AC010424.2-201ENST00000607594 443 ntBASIC5.09□□□□□ -1.6
CHD7Q9P2D1 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.6
CHD7Q9P2D1 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CHD7Q9P2D1 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
CHD7Q9P2D1 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CHD7Q9P2D1 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
CHD7Q9P2D1 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 AL358176.3-201ENST00000420757 454 ntBASIC5.08□□□□□ -1.6
CHD7Q9P2D1 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 PRSS3P4-201ENST00000453323 162 ntBASIC5.08□□□□□ -1.6
CHD7Q9P2D1 RPL21P126-201ENST00000470049 478 ntBASIC5.08□□□□□ -1.6
CHD7Q9P2D1 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 AL133338.2-201ENST00000604292 736 ntBASIC5.08□□□□□ -1.6
CHD7Q9P2D1 AC099676.1-201ENST00000608886 657 ntBASIC5.08□□□□□ -1.6
CHD7Q9P2D1 AL049794.2-201ENST00000616301 365 ntBASIC5.08□□□□□ -1.6
CHD7Q9P2D1 AL022401.1-201ENST00000619498 108 ntBASIC5.08□□□□□ -1.6
CHD7Q9P2D1 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 GNG5P2-201ENST00000372054 207 ntBASIC5.08□□□□□ -1.6
CHD7Q9P2D1 MIR670-201ENST00000390142 98 ntBASIC5.08□□□□□ -1.6
CHD7Q9P2D1 RAB9AP4-201ENST00000415230 609 ntBASIC5.08□□□□□ -1.6
CHD7Q9P2D1 AL139095.3-201ENST00000419672 1203 ntBASIC5.08□□□□□ -1.6
CHD7Q9P2D1 HSFY6P-201ENST00000445573 403 ntBASIC5.08□□□□□ -1.6
CHD7Q9P2D1 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 AC069542.2-201ENST00000624816 216 ntBASIC5.08□□□□□ -1.6
CHD7Q9P2D1 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 CAST-202ENST00000325674 3356 ntTSL 5 BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHD7Q9P2D1 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 TBCAP2-201ENST00000416175 326 ntBASIC5.07□□□□□ -1.6
CHD7Q9P2D1 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 AC090804.1-201ENST00000448870 490 ntBASIC5.07□□□□□ -1.6
CHD7Q9P2D1 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 AC073073.1-201ENST00000493920 463 ntBASIC5.07□□□□□ -1.6
CHD7Q9P2D1 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 MRPL49P2-201ENST00000521066 465 ntBASIC5.07□□□□□ -1.6
CHD7Q9P2D1 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 MAPK10-263ENST00000641052 4307 ntBASIC5.07□□□□□ -1.6
CHD7Q9P2D1 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms