Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 Y_RNA.67-201ENST00000362870 100 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 PRELID1P2-201ENST00000407805 396 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 Y_RNA.598-201ENST00000410480 95 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 RPL17P17-201ENST00000419491 557 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 B3GALNT1P1-201ENST00000420569 975 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 FTH1P10-202ENST00000430907 550 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC234064.1-201ENST00000436312 247 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 SDCBPP1-201ENST00000440192 890 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC108039.2-201ENST00000440214 359 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AL353093.1-201ENST00000441292 436 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 Z82190.1-201ENST00000454534 490 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 RN7SL233P-201ENST00000469988 277 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 RN7SL332P-201ENST00000482163 254 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 RPL7AP30-201ENST00000482859 796 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC111193.1-201ENST00000504097 155 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC026412.2-201ENST00000512270 1075 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 OR5M7P-201ENST00000526140 972 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC087276.1-201ENST00000529659 480 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC025260.1-201ENST00000548858 430 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC008737.2-201ENST00000599446 118 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC012065.3-201ENST00000602736 439 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 U47924.1-201ENST00000606539 434 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AP005137.2-201ENST00000609238 400 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AL133215.3-201ENST00000609801 448 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC027807.2-201ENST00000616099 408 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AL355974.3-201ENST00000617383 467 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 VN2R3P-201ENST00000422626 1412 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC009220.2-201ENST00000489759 1751 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 SOCS5P5-201ENST00000402732 1586 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 LARP1BP1-201ENST00000506036 1359 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 METTL21EP-201ENST00000298105 713 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 Y_RNA.128-201ENST00000363391 112 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 SNORA70G-201ENST00000383923 142 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 Y_RNA.459-201ENST00000384251 102 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 RNU6-185P-201ENST00000384421 107 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 PTMAP8-201ENST00000397729 342 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 EEF1GP6-201ENST00000402309 905 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AC017035.1-201ENST00000411999 1115 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 OFD1P12Y-201ENST00000427963 1207 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AC022022.1-201ENST00000430304 178 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AL365400.1-201ENST00000431854 640 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 MYO5BP3-201ENST00000431872 1279 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 AC005040.1-201ENST00000437783 482 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 Z98949.2-201ENST00000440996 144 ntBASIC7.25□□□□□ -1.25
CUEDC1Q9NWM3 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms