Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 ACA64.4-201ENST00000459070 127 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 CR383656.1-201ENST00000484916 377 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 RPL34P33-201ENST00000486062 334 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 RN7SKP288-201ENST00000516227 268 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AC104417.1-201ENST00000523974 751 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AC011611.5-201ENST00000552477 578 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AC126615.2-201ENST00000553003 515 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AL078601.3-201ENST00000573303 535 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AC012146.2-201ENST00000576545 416 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 MIR4502-201ENST00000580432 81 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AC005244.1-201ENST00000582566 339 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 MIR4443-201ENST00000585052 53 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AC119403.2-201ENST00000590960 598 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AC068020.1-201ENST00000594215 661 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AC146944.4-201ENST00000602697 718 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AC130352.1-201ENST00000602979 661 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AL138895.2-201ENST00000603019 178 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AL035411.2-201ENST00000604022 421 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 MIR6721-201ENST00000617181 87 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AL355974.3-201ENST00000617383 467 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AC096708.4-201ENST00000620563 552 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AL390318.1-201ENST00000624564 687 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.59□□□□□ -1.52
AMBRA1Q9C0C7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
AMBRA1Q9C0C7 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
AMBRA1Q9C0C7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
AMBRA1Q9C0C7 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
AMBRA1Q9C0C7 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
AMBRA1Q9C0C7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.59□□□□□ -1.52
AMBRA1Q9C0C7 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.59□□□□□ -1.52
AMBRA1Q9C0C7 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
AMBRA1Q9C0C7 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 NXF4-202ENST00000416098 1465 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 MIR133A2-201ENST00000347538 102 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 SNORD116-12-201ENST00000384468 92 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 SKINT1L-201ENST00000401057 817 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AL136310.1-201ENST00000404926 654 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 RNU4-74P-201ENST00000411280 161 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 METTL15P3-201ENST00000415522 1221 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 RPS3AP37-201ENST00000419176 745 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 RPS15AP30-201ENST00000420976 390 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 OR5M12P-201ENST00000423388 929 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 NDUFA5P10-201ENST00000432147 357 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 MTND6P5-201ENST00000448266 512 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 RSL24D1P3-201ENST00000449255 495 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 RPL7P45-201ENST00000455851 743 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 RN7SL552P-201ENST00000462094 276 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 PRDX3P4-201ENST00000470828 747 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 RPL7P51-201ENST00000490532 749 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AC091874.2-201ENST00000505889 720 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 SETP21-201ENST00000514799 892 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms