Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 DNAJC19P6-201ENST00000401853 280 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AL449283.1-202ENST00000418249 604 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 REREP1Y-201ENST00000422655 198 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AKR1B10P1-201ENST00000425765 942 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AC092634.2-201ENST00000428146 1010 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 REREP2Y-201ENST00000439103 200 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 OR10R1P-201ENST00000441524 1141 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 MTND1P31-201ENST00000449206 961 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AC005077.1-201ENST00000449226 375 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 MTCO2P6-201ENST00000463134 685 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AC099521.1-201ENST00000482557 334 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 CR383656.1-201ENST00000484916 377 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 RPS12P31-201ENST00000491419 398 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 BOLA3P3-201ENST00000505182 232 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AC093752.1-206ENST00000511823 336 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AC139103.1-201ENST00000534696 1030 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 RPA2P1-201ENST00000556557 721 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AL356801.1-201ENST00000559320 294 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AC060780.2-201ENST00000589047 198 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AC068768.2-201ENST00000602352 343 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 ELOCP35-201ENST00000604289 336 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AC124916.2-201ENST00000604416 224 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AC092266.1-201ENST00000610958 165 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AL139099.4-201ENST00000614802 114 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AL355974.3-201ENST00000617383 467 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AC073569.3-201ENST00000619055 682 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AL158152.1-201ENST00000602652 1435 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AC008627.1-201ENST00000517511 1704 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AL592429.1-201ENST00000403909 1473 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AC104966.1-201ENST00000467010 1464 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 RNU6-666P-201ENST00000363499 107 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 RNA5SP27-201ENST00000363839 119 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 RNU6-236P-201ENST00000363886 106 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 RPL11P3-201ENST00000395256 523 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AC105402.1-201ENST00000413336 545 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 BMS1P13-201ENST00000417301 885 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 RPS4XP5-201ENST00000419038 768 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 RPS4XP16-201ENST00000427198 791 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AL445928.1-201ENST00000435545 222 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 CFL1P4-201ENST00000451536 498 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 Z83838.1-202ENST00000456225 839 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 RPL7P32-201ENST00000457119 744 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AC010627.1-201ENST00000503819 1294 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AC092349.1-201ENST00000504903 310 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 HSD3BP3-201ENST00000514706 994 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AC097486.1-201ENST00000515331 210 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 RNU6-1004P-201ENST00000516584 111 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AC027369.2-201ENST00000528030 440 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AC090236.2-201ENST00000587933 1101 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms