Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 DUTP7-201ENST00000507982 486 ntBASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 IGKV2-19-201ENST00000518132 283 ntBASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 AC008083.2-201ENST00000546707 476 ntBASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 AC127381.1-201ENST00000555979 939 ntBASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 MRPS21P7-201ENST00000566937 238 ntBASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 SNORD95-201ENST00000579879 68 ntBASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 AC073111.2-201ENST00000605657 1075 ntBASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
CHMP4AQ9BY43 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CHMP4AQ9BY43 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
CHMP4AQ9BY43 AC009962.1-201ENST00000567327 3813 ntBASIC7.21□□□□□ -1.25
CHMP4AQ9BY43 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
CHMP4AQ9BY43 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC7.21□□□□□ -1.25
CHMP4AQ9BY43 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC7.21□□□□□ -1.25
CHMP4AQ9BY43 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC7.21□□□□□ -1.25
CHMP4AQ9BY43 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CHMP4AQ9BY43 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CHMP4AQ9BY43 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.21□□□□□ -1.25
CHMP4AQ9BY43 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CHMP4AQ9BY43 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CHMP4AQ9BY43 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC7.21□□□□□ -1.25
CHMP4AQ9BY43 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 RNA5SP319-201ENST00000362768 119 ntBASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 Z93019.1-201ENST00000416450 973 ntBASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 NDUFA5P10-201ENST00000432147 357 ntBASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 OR2AF1P-201ENST00000454899 889 ntBASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 UBA52P3-201ENST00000491303 382 ntBASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 AC090543.1-201ENST00000492168 485 ntBASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 BX510359.5-201ENST00000515651 304 ntBASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 AC010245.2-201ENST00000606908 1167 ntBASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 MIR6862-1-201ENST00000613016 70 ntBASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 MIR6862-2-201ENST00000614755 70 ntBASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 AC074276.2-201ENST00000619891 348 ntBASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4AQ9BY43 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 OR4F13P-202ENST00000560066 2054 ntBASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 RPS20P1-201ENST00000434853 354 ntBASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 RSL24D1P2-201ENST00000445584 366 ntBASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 GLUD1P3-202ENST00000508551 200 ntBASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 AC084824.2-201ENST00000548906 345 ntBASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 HSPE1P2-201ENST00000554777 306 ntBASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 DHFRP1-201ENST00000579682 559 ntBASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 PSMA6P4-201ENST00000603247 718 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms