Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 MTND2P22-201ENST00000444325 1033 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC025459.1-201ENST00000504072 156 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 SNORA31.13-201ENST00000516624 135 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC013701.1-201ENST00000522657 465 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC104417.1-201ENST00000523974 751 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC126615.2-201ENST00000553003 515 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 PCNAP1-202ENST00000595299 752 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC018618.2-201ENST00000604770 446 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC025588.2-201ENST00000604851 466 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC092954.1-201ENST00000609121 445 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AL159169.2-201ENST00000610061 1269 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AP002782.1-201ENST00000623107 614 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AP002967.1-201ENST00000624203 539 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC079416.3-201ENST00000624479 549 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC129915.3-201ENST00000634128 948 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC012078.1-201ENST00000405035 1646 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 AC117409.1-201ENST00000470499 1310 ntBASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTHRC1Q96CG8 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 TMSB4XP2-201ENST00000335179 210 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 RNU4-31P-201ENST00000384211 141 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 ATP5HP3-201ENST00000396994 486 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 LRRC37BP1-201ENST00000398851 714 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 LYPLA1P3-201ENST00000402650 695 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AL021331.1-201ENST00000402817 582 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 HMGB1P13-201ENST00000406019 642 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 HMGN1P20-201ENST00000411849 300 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 MTND4P3-201ENST00000417829 541 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AL035660.1-201ENST00000422041 222 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 CRIP1P1-201ENST00000427567 185 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AC092685.1-201ENST00000447960 1243 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AC093166.4-201ENST00000457867 318 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 RNU1-88P-201ENST00000459274 128 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 NAP1L1P3-201ENST00000462291 880 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AC084754.1-201ENST00000463466 464 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AC107398.1-201ENST00000486904 505 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 PDCL3P4-201ENST00000489621 720 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 RPS12P31-201ENST00000491419 398 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AC093815.1-201ENST00000508637 280 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 HMGN2P36-201ENST00000529541 409 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 AC008126.1-201ENST00000549019 480 ntBASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTHRC1Q96CG8 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms