Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.32□□□□□ -1.4
HPS3Q969F9 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.32□□□□□ -1.4
HPS3Q969F9 HMGB1P5-202ENST00000451497 985 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HPS3Q969F9 WDR78-207ENST00000488333 613 ntTSL 3 BASIC6.32□□□□□ -1.4
HPS3Q969F9 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.32□□□□□ -1.4
HPS3Q969F9 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.32□□□□□ -1.4
HPS3Q969F9 ASNSP4-201ENST00000511103 447 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 IGLV3-24-201ENST00000517477 197 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.32□□□□□ -1.4
HPS3Q969F9 IGHV3-63-201ENST00000518422 341 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.32□□□□□ -1.4
HPS3Q969F9 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.32□□□□□ -1.4
HPS3Q969F9 AP001372.4-201ENST00000524889 472 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 AP000648.1-201ENST00000529682 397 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 AC137627.1-201ENST00000545761 289 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.32□□□□□ -1.4
HPS3Q969F9 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.32□□□□□ -1.4
HPS3Q969F9 AC023825.1-201ENST00000566704 1030 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.32□□□□□ -1.4
HPS3Q969F9 MIR4509-3-201ENST00000578671 94 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 MIR4509-2-201ENST00000583920 94 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.32□□□□□ -1.4
HPS3Q969F9 AP002884.5-201ENST00000595053 1132 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 AC027243.2-201ENST00000602530 724 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 AL031601.1-201ENST00000605702 394 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.32□□□□□ -1.4
HPS3Q969F9 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 MIR4509-1-201ENST00000618224 94 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 AC083865.1-201ENST00000636634 831 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HPS3Q969F9 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
HPS3Q969F9 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HPS3Q969F9 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HPS3Q969F9 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HPS3Q969F9 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.32□□□□□ -1.4
HPS3Q969F9 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HPS3Q969F9 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.32□□□□□ -1.4
HPS3Q969F9 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HPS3Q969F9 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HPS3Q969F9 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HPS3Q969F9 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.31□□□□□ -1.4
HPS3Q969F9 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
HPS3Q969F9 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.31□□□□□ -1.4
HPS3Q969F9 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HPS3Q969F9 RNU4-7P-201ENST00000364758 141 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 MT-TP-201ENST00000387461 68 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HPS3Q969F9 RPS6P23-201ENST00000413224 722 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 AL590806.1-201ENST00000415818 853 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 FO393414.1-201ENST00000428697 1184 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.31□□□□□ -1.4
HPS3Q969F9 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.31□□□□□ -1.4
HPS3Q969F9 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.31□□□□□ -1.4
HPS3Q969F9 AC069540.1-201ENST00000446320 988 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 RPS23P9-201ENST00000448848 438 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 AP006222.1-205ENST00000450734 457 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.31□□□□□ -1.4
HPS3Q969F9 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.31□□□□□ -1.4
HPS3Q969F9 CALM1P2-201ENST00000452941 448 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 RPS17P15-201ENST00000475609 349 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.31□□□□□ -1.4
HPS3Q969F9 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.31□□□□□ -1.4
HPS3Q969F9 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.31□□□□□ -1.4
HPS3Q969F9 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.31□□□□□ -1.4
HPS3Q969F9 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.31□□□□□ -1.4
HPS3Q969F9 AL163952.1-202ENST00000569625 600 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 AP002802.2-201ENST00000605877 235 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 VN1R9P-201ENST00000614184 867 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 AL359513.1-201ENST00000614364 557 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 AL669942.2-201ENST00000620352 697 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 AC129778.1-202ENST00000623812 261 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.31□□□□□ -1.4
HPS3Q969F9 AL591379.1-207ENST00000635982 261 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.31□□□□□ -1.4
HPS3Q969F9 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.31□□□□□ -1.4
HPS3Q969F9 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HPS3Q969F9 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HPS3Q969F9 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.31□□□□□ -1.4
HPS3Q969F9 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.31□□□□□ -1.4
HPS3Q969F9 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.31□□□□□ -1.4
HPS3Q969F9 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.31□□□□□ -1.4
HPS3Q969F9 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.31□□□□□ -1.4
HPS3Q969F9 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.31□□□□□ -1.4
HPS3Q969F9 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS3Q969F9 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.3□□□□□ -1.4
HPS3Q969F9 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
HPS3Q969F9 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HPS3Q969F9 PWAR1-201ENST00000624188 2414 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
HPS3Q969F9 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HPS3Q969F9 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.3□□□□□ -1.4
HPS3Q969F9 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HPS3Q969F9 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HPS3Q969F9 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.3□□□□□ -1.4
HPS3Q969F9 OR52B3P-201ENST00000314715 928 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 RNU6-207P-201ENST00000384137 107 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 RNU1-136P-201ENST00000384181 164 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 RNU11-201ENST00000387069 134 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 ATF1P1-201ENST00000406040 927 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms