Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 RN7SL802P-201ENST00000577858 299 ntBASIC8.31□□□□□ -1.08
TOPBP1Q92547 AC004232.3-201ENST00000622977 525 ntBASIC8.31□□□□□ -1.08
TOPBP1Q92547 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TOPBP1Q92547 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TOPBP1Q92547 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.31□□□□□ -1.08
TOPBP1Q92547 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
TOPBP1Q92547 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC8.31□□□□□ -1.08
TOPBP1Q92547 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
TOPBP1Q92547 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC8.31□□□□□ -1.08
TOPBP1Q92547 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TOPBP1Q92547 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
TOPBP1Q92547 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TOPBP1Q92547 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC8.3□□□□□ -1.08
TOPBP1Q92547 AC108751.5-201ENST00000492880 1336 ntBASIC8.3□□□□□ -1.08
TOPBP1Q92547 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.3□□□□□ -1.08
TOPBP1Q92547 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TOPBP1Q92547 SNORA48.7-201ENST00000391302 135 ntBASIC8.3□□□□□ -1.08
TOPBP1Q92547 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
TOPBP1Q92547 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
TOPBP1Q92547 ST13P16-201ENST00000401760 781 ntBASIC8.3□□□□□ -1.08
TOPBP1Q92547 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC8.3□□□□□ -1.08
TOPBP1Q92547 RPS27AP12-201ENST00000429552 465 ntBASIC8.3□□□□□ -1.08
TOPBP1Q92547 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC8.3□□□□□ -1.08
TOPBP1Q92547 AC091180.1-201ENST00000462104 372 ntBASIC8.3□□□□□ -1.08
TOPBP1Q92547 OR2A3P-201ENST00000493774 953 ntBASIC8.3□□□□□ -1.08
TOPBP1Q92547 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TOPBP1Q92547 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC8.3□□□□□ -1.08
TOPBP1Q92547 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC8.3□□□□□ -1.08
TOPBP1Q92547 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC8.3□□□□□ -1.08
TOPBP1Q92547 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC8.3□□□□□ -1.08
TOPBP1Q92547 MIR92B-201ENST00000607575 96 ntBASIC8.3□□□□□ -1.08
TOPBP1Q92547 AL022401.1-201ENST00000619498 108 ntBASIC8.3□□□□□ -1.08
TOPBP1Q92547 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC8.3□□□□□ -1.08
TOPBP1Q92547 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TOPBP1Q92547 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC8.3□□□□□ -1.08
TOPBP1Q92547 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
TOPBP1Q92547 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TOPBP1Q92547 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
TOPBP1Q92547 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
TOPBP1Q92547 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
TOPBP1Q92547 RNU6ATAC34P-201ENST00000408879 121 ntBASIC8.29□□□□□ -1.08
TOPBP1Q92547 OR51B3P-201ENST00000412287 913 ntBASIC8.29□□□□□ -1.08
TOPBP1Q92547 AL591848.1-201ENST00000413092 322 ntBASIC8.29□□□□□ -1.08
TOPBP1Q92547 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC8.29□□□□□ -1.08
TOPBP1Q92547 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC8.29□□□□□ -1.08
TOPBP1Q92547 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC8.29□□□□□ -1.08
TOPBP1Q92547 HMGB1P4-201ENST00000455362 567 ntBASIC8.29□□□□□ -1.08
TOPBP1Q92547 AC022133.1-201ENST00000490961 571 ntBASIC8.29□□□□□ -1.08
TOPBP1Q92547 AC104971.1-201ENST00000495117 578 ntBASIC8.29□□□□□ -1.08
TOPBP1Q92547 HMGB1P23-201ENST00000518743 568 ntBASIC8.29□□□□□ -1.08
TOPBP1Q92547 NPM1P6-201ENST00000521088 871 ntBASIC8.29□□□□□ -1.08
TOPBP1Q92547 FAM27B-201ENST00000610601 213 ntBASIC8.29□□□□□ -1.08
TOPBP1Q92547 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC8.29□□□□□ -1.08
TOPBP1Q92547 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
TOPBP1Q92547 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC8.29□□□□□ -1.08
TOPBP1Q92547 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TOPBP1Q92547 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
TOPBP1Q92547 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.29□□□□□ -1.08
TOPBP1Q92547 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC8.29□□□□□ -1.08
TOPBP1Q92547 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC8.29□□□□□ -1.08
TOPBP1Q92547 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC8.29□□□□□ -1.08
TOPBP1Q92547 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC8.29□□□□□ -1.08
TOPBP1Q92547 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8.29□□□□□ -1.08
TOPBP1Q92547 AL359073.1-201ENST00000448036 403 ntBASIC8.29□□□□□ -1.08
TOPBP1Q92547 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC8.29□□□□□ -1.08
TOPBP1Q92547 MTND2P28-201ENST00000457540 1044 ntBASIC8.29□□□□□ -1.08
TOPBP1Q92547 AC106785.1-201ENST00000565935 262 ntBASIC8.29□□□□□ -1.08
TOPBP1Q92547 AC007497.1-201ENST00000610421 561 ntBASIC8.29□□□□□ -1.08
TOPBP1Q92547 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC8.29□□□□□ -1.08
TOPBP1Q92547 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC8.28□□□□□ -1.08
TOPBP1Q92547 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
TOPBP1Q92547 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC8.28□□□□□ -1.08
TOPBP1Q92547 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TOPBP1Q92547 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
TOPBP1Q92547 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
TOPBP1Q92547 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
TOPBP1Q92547 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
TOPBP1Q92547 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
TOPBP1Q92547 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC8.28□□□□□ -1.08
TOPBP1Q92547 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TOPBP1Q92547 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC8.28□□□□□ -1.08
TOPBP1Q92547 BUD31P1-201ENST00000521828 359 ntBASIC8.28□□□□□ -1.08
TOPBP1Q92547 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC8.28□□□□□ -1.08
TOPBP1Q92547 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC8.28□□□□□ -1.08
TOPBP1Q92547 AC024941.1-201ENST00000612250 334 ntBASIC8.28□□□□□ -1.08
TOPBP1Q92547 AC019206.1-201ENST00000621938 425 ntBASIC8.28□□□□□ -1.08
TOPBP1Q92547 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC8.28□□□□□ -1.08
TOPBP1Q92547 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC8.28□□□□□ -1.08
TOPBP1Q92547 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
TOPBP1Q92547 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
TOPBP1Q92547 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
TOPBP1Q92547 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC8.27□□□□□ -1.09
TOPBP1Q92547 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
TOPBP1Q92547 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
TOPBP1Q92547 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TOPBP1Q92547 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TOPBP1Q92547 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC8.27□□□□□ -1.09
TOPBP1Q92547 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
TOPBP1Q92547 MIR23B-201ENST00000384832 97 ntBASIC8.27□□□□□ -1.09
TOPBP1Q92547 OR6C69P-201ENST00000394268 893 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms