Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AP001207.2-201ENST00000519490 539 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 OR5AM1P-201ENST00000532136 1032 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC010735.1-201ENST00000567305 1026 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC005412.1-201ENST00000580812 1049 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 MIR4260-201ENST00000583107 67 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AL160237.3-201ENST00000604114 1013 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC009948.4-201ENST00000604692 675 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC010632.3-201ENST00000611377 369 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 MIR6806-201ENST00000622141 64 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC015722.2-201ENST00000622210 551 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC083865.1-201ENST00000636634 831 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AP000432.2-201ENST00000624164 2048 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 RNU6-252P-201ENST00000363232 107 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 RNU6-481P-201ENST00000384194 107 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 NPM1P37-201ENST00000403105 874 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 RPL10P10-201ENST00000403509 664 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AL158825.1-201ENST00000414735 521 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 YRDCP3-201ENST00000456507 480 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 NXT1P1-201ENST00000458481 316 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 RPSAP39-201ENST00000467439 883 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 ATP5LP5-201ENST00000483050 299 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC112673.1-201ENST00000513168 575 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 SEPT10P1-201ENST00000517342 1162 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 TRIM51DP-201ENST00000529746 596 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC068305.2-201ENST00000550567 1205 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AL121839.1-201ENST00000556233 1185 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC021483.2-201ENST00000567415 758 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 NIFKP6-201ENST00000598115 845 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AL139124.1-201ENST00000609123 421 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC093673.2-201ENST00000609674 331 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 MIR6889-201ENST00000613185 59 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC079395.3-201ENST00000615161 484 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC138907.10-201ENST00000623708 983 ntBASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4AQ8WYN0 AC079097.1-201ENST00000512187 1399 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms