Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 RN7SKP104-201ENST00000362605 328 ntBASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 COX5BP7-201ENST00000414780 274 ntBASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 RHOT1P3-201ENST00000436571 331 ntBASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 RN7SL443P-201ENST00000464331 290 ntBASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 RN7SL481P-201ENST00000477764 299 ntBASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 AC090527.3-201ENST00000619041 548 ntBASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 AP000473.2-201ENST00000602659 1537 ntBASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 AL360270.2-201ENST00000562952 5985 ntBASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 AC126755.2-208ENST00000327792 462 ntBASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 AC138969.1-213ENST00000331436 462 ntBASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 MIR133A2-201ENST00000347538 102 ntBASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 MIR192-201ENST00000384915 110 ntBASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 RNA5SP241-201ENST00000391326 114 ntBASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 RPS16P5-201ENST00000406501 404 ntBASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 RPS17P2-201ENST00000461663 408 ntBASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 AC097484.1-201ENST00000471148 389 ntBASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 AC063949.1-201ENST00000552900 865 ntBASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 AC022884.2-201ENST00000578535 580 ntBASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 uc_338.7-201ENST00000621834 124 ntBASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHROOM3Q8TF72 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 SNORA67-201ENST00000384423 137 ntBASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 C4BPAP2-201ENST00000428434 478 ntBASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 AL691482.1-201ENST00000453255 87 ntBASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 RN7SL441P-201ENST00000492388 296 ntBASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 RPL37AP8-201ENST00000494116 276 ntBASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 AC234771.5-201ENST00000600161 514 ntBASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 AC095055.1-201ENST00000603472 1113 ntBASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 AL353662.3-201ENST00000625131 237 ntBASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 SNORA2.3-201ENST00000383920 135 ntBASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 MRPS21P3-201ENST00000436696 262 ntBASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 KNOP1P3-201ENST00000446933 426 ntBASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 AC096741.1-201ENST00000472250 846 ntBASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.27□□□□□ -1.57
SHROOM3Q8TF72 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms