Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AC245505.1-201ENST00000556398 224 ntBASIC6.77□□□□□ -1.33
PHC3Q8NDX5 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 ABBA01006766.1-201ENST00000584728 294 ntBASIC6.77□□□□□ -1.33
PHC3Q8NDX5 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 RPS27AP19-201ENST00000597285 458 ntBASIC6.77□□□□□ -1.33
PHC3Q8NDX5 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 AC108747.1-201ENST00000609508 535 ntBASIC6.77□□□□□ -1.33
PHC3Q8NDX5 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.77□□□□□ -1.33
PHC3Q8NDX5 PTCHD3P1-201ENST00000612350 537 ntBASIC6.77□□□□□ -1.33
PHC3Q8NDX5 AL121873.1-201ENST00000616013 524 ntBASIC6.77□□□□□ -1.33
PHC3Q8NDX5 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 U6.42-201ENST00000618440 107 ntBASIC6.77□□□□□ -1.33
PHC3Q8NDX5 AC005840.5-201ENST00000619166 599 ntBASIC6.77□□□□□ -1.33
PHC3Q8NDX5 RNU6-368P-201ENST00000620928 107 ntBASIC6.77□□□□□ -1.33
PHC3Q8NDX5 RNU6-538P-201ENST00000622329 107 ntBASIC6.77□□□□□ -1.33
PHC3Q8NDX5 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PHC3Q8NDX5 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 OR10D1P-201ENST00000355343 936 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 RNU6-621P-201ENST00000364752 109 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 RN7SKP47-201ENST00000365347 328 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 MIR16-1-201ENST00000385271 89 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AL136100.1-201ENST00000407696 330 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 RPLP1P10-201ENST00000413972 339 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AL161449.1-201ENST00000414531 1199 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 OFD1P13Y-201ENST00000431179 1232 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AC008072.1-201ENST00000434254 824 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 RPL7P48-201ENST00000461513 746 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AC090071.1-201ENST00000507713 644 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 SCARNA11.1-201ENST00000516918 132 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 PHBP2-201ENST00000532859 806 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 NXPE2P1-201ENST00000543705 726 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 RPL3P13-201ENST00000550415 216 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AC090888.3-201ENST00000558917 509 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AL512347.1-201ENST00000566420 503 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AC087575.1-201ENST00000585087 229 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AC116165.3-201ENST00000614524 400 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AL031658.2-201ENST00000616850 651 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 AC073862.4-201ENST00000622982 854 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.76□□□□□ -1.33
PHC3Q8NDX5 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PHC3Q8NDX5 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms