Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SRSF1P1-201ENST00000424058 520 ntBASIC4.82□□□□□ -1.64
RFX4Q33E94 GSTM5P1-201ENST00000434751 660 ntBASIC4.82□□□□□ -1.64
RFX4Q33E94 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.82□□□□□ -1.64
RFX4Q33E94 GAPDHP25-201ENST00000447061 1001 ntBASIC4.82□□□□□ -1.64
RFX4Q33E94 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFX4Q33E94 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.82□□□□□ -1.64
RFX4Q33E94 NPM1P29-201ENST00000483112 803 ntBASIC4.82□□□□□ -1.64
RFX4Q33E94 RN7SL423P-201ENST00000486202 304 ntBASIC4.82□□□□□ -1.64
RFX4Q33E94 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.82□□□□□ -1.64
RFX4Q33E94 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFX4Q33E94 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.82□□□□□ -1.64
RFX4Q33E94 RNA5SP249-201ENST00000516127 99 ntBASIC4.82□□□□□ -1.64
RFX4Q33E94 RN7SKP99-201ENST00000517028 307 ntBASIC4.82□□□□□ -1.64
RFX4Q33E94 AC078878.1-201ENST00000539832 958 ntBASIC4.82□□□□□ -1.64
RFX4Q33E94 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.82□□□□□ -1.64
RFX4Q33E94 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.82□□□□□ -1.64
RFX4Q33E94 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.82□□□□□ -1.64
RFX4Q33E94 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFX4Q33E94 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.82□□□□□ -1.64
RFX4Q33E94 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.82□□□□□ -1.64
RFX4Q33E94 AC060766.1-201ENST00000590824 627 ntBASIC4.82□□□□□ -1.64
RFX4Q33E94 AC132068.1-201ENST00000623805 459 ntBASIC4.82□□□□□ -1.64
RFX4Q33E94 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.82□□□□□ -1.64
RFX4Q33E94 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.82□□□□□ -1.64
RFX4Q33E94 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.82□□□□□ -1.64
RFX4Q33E94 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFX4Q33E94 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFX4Q33E94 OR55B1P-203ENST00000641518 2602 ntBASIC4.82□□□□□ -1.64
RFX4Q33E94 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.82□□□□□ -1.64
RFX4Q33E94 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
RFX4Q33E94 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.82□□□□□ -1.64
RFX4Q33E94 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFX4Q33E94 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFX4Q33E94 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.82□□□□□ -1.64
RFX4Q33E94 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFX4Q33E94 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFX4Q33E94 MTCO1P15-201ENST00000529569 1526 ntBASIC4.82□□□□□ -1.64
RFX4Q33E94 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.81□□□□□ -1.64
RFX4Q33E94 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFX4Q33E94 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RFX4Q33E94 AC093909.5-201ENST00000621839 1799 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFX4Q33E94 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
RFX4Q33E94 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.81□□□□□ -1.64
RFX4Q33E94 AC139713.2-215ENST00000641428 5037 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFX4Q33E94 HSPA8P15-201ENST00000401676 786 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 BMS1P17-202ENST00000416720 316 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.81□□□□□ -1.64
RFX4Q33E94 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFX4Q33E94 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.81□□□□□ -1.64
RFX4Q33E94 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.81□□□□□ -1.64
RFX4Q33E94 CLUHP1-201ENST00000435012 1190 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 BTG3P1-201ENST00000435859 716 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 FMO7P-201ENST00000436045 768 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.81□□□□□ -1.64
RFX4Q33E94 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.81□□□□□ -1.64
RFX4Q33E94 ARAFP2-201ENST00000440565 559 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 EEF1B2P6-201ENST00000445713 673 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 AC105399.1-202ENST00000447303 205 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 NDUFA5P5-201ENST00000468361 342 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 AC094085.1-201ENST00000468914 584 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.81□□□□□ -1.64
RFX4Q33E94 AC058823.1-201ENST00000485315 474 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.81□□□□□ -1.64
RFX4Q33E94 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.81□□□□□ -1.64
RFX4Q33E94 AL671862.1-201ENST00000515851 349 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.81□□□□□ -1.64
RFX4Q33E94 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.81□□□□□ -1.64
RFX4Q33E94 IGKV2-4-201ENST00000523070 340 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.81□□□□□ -1.64
RFX4Q33E94 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.81□□□□□ -1.64
RFX4Q33E94 AC005726.4-201ENST00000582858 458 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.81□□□□□ -1.64
RFX4Q33E94 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.81□□□□□ -1.64
RFX4Q33E94 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.81□□□□□ -1.64
RFX4Q33E94 MTCO1P1-201ENST00000624263 1081 ntBASIC4.81□□□□□ -1.64
RFX4Q33E94 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.81□□□□□ -1.64
RFX4Q33E94 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.81□□□□□ -1.64
RFX4Q33E94 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFX4Q33E94 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RFX4Q33E94 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFX4Q33E94 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFX4Q33E94 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.81□□□□□ -1.64
RFX4Q33E94 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFX4Q33E94 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.81□□□□□ -1.64
RFX4Q33E94 NEAT1-202ENST00000501122 22743 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 CASC19-255ENST00000641733 1385 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFX4Q33E94 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.8□□□□□ -1.64
RFX4Q33E94 AC091305.2-201ENST00000624049 1576 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFX4Q33E94 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RFX4Q33E94 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFX4Q33E94 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RFX4Q33E94 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RFX4Q33E94 U3.32-201ENST00000408116 212 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 AL596448.1-201ENST00000415024 392 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 OR13Z1P-201ENST00000416141 834 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms