Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC112694.2-201ENST00000623697 768 ntBASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 NXF4-202ENST00000416098 1465 ntBASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM1Q2M3G4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 AC093849.1-201ENST00000563631 2209 ntBASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 AL078599.1-201ENST00000402075 293 ntBASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 COX6B1P1-201ENST00000415962 213 ntBASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 NIPA2P1-201ENST00000426223 976 ntBASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 NDUFA5P8-201ENST00000449019 346 ntBASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 RPL7P16-201ENST00000479738 738 ntBASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 OR2A3P-201ENST00000493774 953 ntBASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 HIGD1AP5-201ENST00000529959 259 ntBASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 AC079075.1-201ENST00000559543 878 ntBASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 AC009117.1-201ENST00000563948 554 ntBASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 EIF3FP1-201ENST00000613970 806 ntBASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 AC245100.2-201ENST00000454544 1679 ntBASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SHROOM1Q2M3G4 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 MIR589-201ENST00000385238 99 ntBASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 AL035419.1-201ENST00000397037 564 ntBASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 SNORA79B-201ENST00000410557 148 ntBASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 AL807761.1-201ENST00000417622 171 ntBASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 CBX1P2-201ENST00000453841 458 ntBASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 TAAR4P-201ENST00000454843 1039 ntBASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 AC079168.1-201ENST00000458741 345 ntBASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 AC008897.1-201ENST00000494006 347 ntBASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 GLUD1P3-202ENST00000508551 200 ntBASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 AC108043.1-201ENST00000512696 574 ntBASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 RN7SKP67-201ENST00000515905 235 ntBASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 RNA5SP43-201ENST00000516559 110 ntBASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 AC087283.1-201ENST00000604029 1074 ntBASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 MIR6810-201ENST00000622701 70 ntBASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 AC135068.12-201ENST00000637370 931 ntBASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.05□□□□□ -1.44
SHROOM1Q2M3G4 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 AL360270.2-201ENST00000562952 5985 ntBASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 AC124944.2-201ENST00000429866 1242 ntBASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms