Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
PCDH1Q08174 Y_RNA.9-201ENST00000362354 101 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 RN7SKP47-201ENST00000365347 328 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 RNA5SP88-201ENST00000365560 109 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDH1Q08174 XGY1-201ENST00000381172 446 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
PCDH1Q08174 MIR16-1-201ENST00000385271 89 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDH1Q08174 AL161909.1-201ENST00000397390 712 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDH1Q08174 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDH1Q08174 AC009237.5-201ENST00000414271 501 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.72□□□□□ -1.33
PCDH1Q08174 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDH1Q08174 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDH1Q08174 GAPDHP49-201ENST00000421421 961 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDH1Q08174 VN1R20P-201ENST00000425215 966 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDH1Q08174 FMO7P-201ENST00000436045 768 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 UBE2FP3-201ENST00000436366 524 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 AL353803.3-201ENST00000444641 335 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 RPL7P31-201ENST00000450192 724 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDH1Q08174 RPL5P12-201ENST00000477071 851 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 AL591122.1-201ENST00000487348 492 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.72□□□□□ -1.33
PCDH1Q08174 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 SNORA20.3-201ENST00000516880 132 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 OR4C1P-201ENST00000530880 937 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.72□□□□□ -1.33
PCDH1Q08174 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.72□□□□□ -1.33
PCDH1Q08174 CFL2-206ENST00000556161 546 ntTSL 4 BASIC6.72□□□□□ -1.33
PCDH1Q08174 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDH1Q08174 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDH1Q08174 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDH1Q08174 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDH1Q08174 AC091304.5-201ENST00000568969 158 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 CCDC58P1-201ENST00000578567 430 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDH1Q08174 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDH1Q08174 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.72□□□□□ -1.33
PCDH1Q08174 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDH1Q08174 AL390208.1-201ENST00000605885 644 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 AC128687.2-201ENST00000609657 566 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 AL353726.1-201ENST00000614041 1000 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDH1Q08174 FKBP1AP4-201ENST00000631775 336 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.72□□□□□ -1.33
PCDH1Q08174 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDH1Q08174 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 GTF2H2B-203ENST00000508065 1432 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 AC114786.1-201ENST00000512892 1415 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 PWRN1-212ENST00000569908 1435 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDH1Q08174 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDH1Q08174 AL359195.2-201ENST00000623657 4412 ntBASIC6.72□□□□□ -1.33
PCDH1Q08174 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.72□□□□□ -1.33
PCDH1Q08174 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
PCDH1Q08174 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDH1Q08174 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
PCDH1Q08174 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
PCDH1Q08174 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH1Q08174 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
PCDH1Q08174 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.71□□□□□ -1.33
PCDH1Q08174 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.71□□□□□ -1.33
PCDH1Q08174 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
PCDH1Q08174 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDH1Q08174 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
PCDH1Q08174 AC092111.2-201ENST00000611627 1414 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH1Q08174 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH1Q08174 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
PCDH1Q08174 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH1Q08174 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH1Q08174 RNU6-185P-201ENST00000384421 107 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH1Q08174 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH1Q08174 AL590002.1-201ENST00000406554 418 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 AC017035.1-201ENST00000411999 1115 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDH1Q08174 AC093698.1-201ENST00000423843 571 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms