Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX4Q06945 RNU6-549P-201ENST00000384433 107 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX4Q06945 VTA1P1-201ENST00000414044 866 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.93□□□□□ -1.3
SOX4Q06945 PAICSP7-201ENST00000419829 962 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 AL109913.1-201ENST00000421173 514 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 CYCSP52-201ENST00000422857 310 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC6.93□□□□□ -1.3
SOX4Q06945 B3GNT2P1-201ENST00000434960 952 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 AL138899.2-201ENST00000439139 499 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 AC093155.1-201ENST00000440164 826 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.93□□□□□ -1.3
SOX4Q06945 CXCR2P1-202ENST00000443392 1074 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.93□□□□□ -1.3
SOX4Q06945 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.93□□□□□ -1.3
SOX4Q06945 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC6.93□□□□□ -1.3
SOX4Q06945 RNU7-140P-201ENST00000459546 60 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 AC091959.2-201ENST00000477363 321 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.93□□□□□ -1.3
SOX4Q06945 AC073358.1-201ENST00000505671 684 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 ARL2BPP4-201ENST00000506854 471 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 HSD3BP3-201ENST00000514706 994 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 AC092709.1-201ENST00000521355 1045 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC6.93□□□□□ -1.3
SOX4Q06945 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.93□□□□□ -1.3
SOX4Q06945 AC005363.1-201ENST00000530779 351 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 AC074029.1-201ENST00000552531 1044 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX4Q06945 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX4Q06945 MIR4271-201ENST00000582451 67 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 SMIM12P1-201ENST00000603004 274 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 AL499605.1-201ENST00000604628 403 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX4Q06945 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.93□□□□□ -1.3
SOX4Q06945 AC015922.4-201ENST00000612568 690 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 AC007014.2-201ENST00000615581 479 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 AC073569.3-201ENST00000619055 682 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 AC073593.1-201ENST00000624500 411 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
SOX4Q06945 AC073869.7-201ENST00000640874 297 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
SOX4Q06945 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
SOX4Q06945 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SOX4Q06945 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.93□□□□□ -1.3
SOX4Q06945 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SOX4Q06945 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SOX4Q06945 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SOX4Q06945 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.93□□□□□ -1.3
SOX4Q06945 HSPD1P7-201ENST00000447985 1686 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX4Q06945 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX4Q06945 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX4Q06945 MTCO1P18-201ENST00000455518 1419 ntBASIC6.93□□□□□ -1.3
SOX4Q06945 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX4Q06945 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.92□□□□□ -1.3
SOX4Q06945 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
SOX4Q06945 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX4Q06945 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.92□□□□□ -1.3
SOX4Q06945 AC005539.1-201ENST00000443768 1479 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX4Q06945 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SOX4Q06945 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX4Q06945 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX4Q06945 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
SOX4Q06945 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.92□□□□□ -1.3
SOX4Q06945 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
SOX4Q06945 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX4Q06945 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SOX4Q06945 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX4Q06945 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.92□□□□□ -1.3
SOX4Q06945 RNU6-31P-201ENST00000384388 108 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 RNY3P10-201ENST00000384764 102 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 MIR621-201ENST00000384919 96 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
SOX4Q06945 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.92□□□□□ -1.3
SOX4Q06945 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX4Q06945 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX4Q06945 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX4Q06945 USP9YP18-201ENST00000425912 695 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX4Q06945 AC108479.1-201ENST00000431142 427 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX4Q06945 GAPDHP34-201ENST00000432112 823 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 RPL23AP76-201ENST00000441860 458 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX4Q06945 AC112653.1-201ENST00000443851 386 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 RBMY3AP-201ENST00000449381 1145 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX4Q06945 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX4Q06945 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
SOX4Q06945 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SOX4Q06945 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC6.92□□□□□ -1.3
SOX4Q06945 AC008837.2-201ENST00000513076 418 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 RNU6-506P-201ENST00000516553 94 ntBASIC6.92□□□□□ -1.3
SOX4Q06945 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.92□□□□□ -1.3
SOX4Q06945 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX4Q06945 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX4Q06945 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.92□□□□□ -1.3
SOX4Q06945 OR5BC1P-201ENST00000529327 739 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms