Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MIR4691-201ENST00000583764 85 ntBASIC5.99□□□□□ -1.45
CCNA1P78396 AF230666.2-201ENST00000602328 725 ntBASIC5.99□□□□□ -1.45
CCNA1P78396 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.99□□□□□ -1.45
CCNA1P78396 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCNA1P78396 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.99□□□□□ -1.45
CCNA1P78396 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
CCNA1P78396 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCNA1P78396 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.99□□□□□ -1.45
CCNA1P78396 AL359955.1-201ENST00000455242 3275 ntBASIC5.99□□□□□ -1.45
CCNA1P78396 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.99□□□□□ -1.45
CCNA1P78396 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.99□□□□□ -1.45
CCNA1P78396 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CCNA1P78396 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCNA1P78396 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCNA1P78396 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CCNA1P78396 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCNA1P78396 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.98□□□□□ -1.45
CCNA1P78396 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.98□□□□□ -1.45
CCNA1P78396 AC079097.1-201ENST00000512187 1399 ntBASIC5.98□□□□□ -1.45
CCNA1P78396 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCNA1P78396 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCNA1P78396 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCNA1P78396 RN7SKP95-201ENST00000362860 303 ntBASIC5.98□□□□□ -1.45
CCNA1P78396 MIR141-201ENST00000384975 95 ntBASIC5.98□□□□□ -1.45
CCNA1P78396 AC013442.1-201ENST00000397347 228 ntBASIC5.98□□□□□ -1.45
CCNA1P78396 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.98□□□□□ -1.45
CCNA1P78396 AL590139.1-201ENST00000416267 400 ntBASIC5.98□□□□□ -1.45
CCNA1P78396 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.98□□□□□ -1.45
CCNA1P78396 AC008072.1-201ENST00000434254 824 ntBASIC5.98□□□□□ -1.45
CCNA1P78396 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.98□□□□□ -1.45
CCNA1P78396 MTND6P5-201ENST00000448266 512 ntBASIC5.98□□□□□ -1.45
CCNA1P78396 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.98□□□□□ -1.45
CCNA1P78396 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCNA1P78396 AC140172.1-201ENST00000502928 141 ntBASIC5.98□□□□□ -1.45
CCNA1P78396 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.98□□□□□ -1.45
CCNA1P78396 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.98□□□□□ -1.45
CCNA1P78396 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCNA1P78396 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCNA1P78396 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.98□□□□□ -1.45
CCNA1P78396 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.98□□□□□ -1.45
CCNA1P78396 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
CCNA1P78396 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.98□□□□□ -1.45
CCNA1P78396 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCNA1P78396 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.98□□□□□ -1.45
CCNA1P78396 MIR4420-201ENST00000583944 77 ntBASIC5.98□□□□□ -1.45
CCNA1P78396 AC244107.2-201ENST00000611773 76 ntBASIC5.98□□□□□ -1.45
CCNA1P78396 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCNA1P78396 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.98□□□□□ -1.45
CCNA1P78396 AC104964.3-201ENST00000606115 2860 ntBASIC5.98□□□□□ -1.45
CCNA1P78396 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCNA1P78396 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CCNA1P78396 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.98□□□□□ -1.45
CCNA1P78396 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CCNA1P78396 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCNA1P78396 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCNA1P78396 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.97□□□□□ -1.45
CCNA1P78396 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCNA1P78396 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCNA1P78396 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CCNA1P78396 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCNA1P78396 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCNA1P78396 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.97□□□□□ -1.45
CCNA1P78396 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCNA1P78396 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCNA1P78396 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CCNA1P78396 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCNA1P78396 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCNA1P78396 AP002530.1-201ENST00000405705 684 ntBASIC5.97□□□□□ -1.45
CCNA1P78396 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.97□□□□□ -1.45
CCNA1P78396 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.97□□□□□ -1.45
CCNA1P78396 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.97□□□□□ -1.45
CCNA1P78396 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.97□□□□□ -1.45
CCNA1P78396 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.97□□□□□ -1.45
CCNA1P78396 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCNA1P78396 AC022133.1-201ENST00000490961 571 ntBASIC5.97□□□□□ -1.45
CCNA1P78396 OR2A3P-201ENST00000493774 953 ntBASIC5.97□□□□□ -1.45
CCNA1P78396 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.97□□□□□ -1.45
CCNA1P78396 COX6B1P5-201ENST00000509843 249 ntBASIC5.97□□□□□ -1.45
CCNA1P78396 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.97□□□□□ -1.45
CCNA1P78396 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.97□□□□□ -1.45
CCNA1P78396 AC091912.1-201ENST00000511351 248 ntBASIC5.97□□□□□ -1.45
CCNA1P78396 SCARNA20.4-201ENST00000516969 131 ntBASIC5.97□□□□□ -1.45
CCNA1P78396 RN7SKP5-201ENST00000517045 272 ntBASIC5.97□□□□□ -1.45
CCNA1P78396 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.97□□□□□ -1.45
CCNA1P78396 AC021006.3-201ENST00000530771 192 ntBASIC5.97□□□□□ -1.45
CCNA1P78396 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.97□□□□□ -1.45
CCNA1P78396 OR7E128P-201ENST00000532736 1024 ntBASIC5.97□□□□□ -1.45
CCNA1P78396 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCNA1P78396 BNIP3P1-201ENST00000547295 580 ntBASIC5.97□□□□□ -1.45
CCNA1P78396 AC008147.3-201ENST00000548666 354 ntBASIC5.97□□□□□ -1.45
CCNA1P78396 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.97□□□□□ -1.45
CCNA1P78396 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.97□□□□□ -1.45
CCNA1P78396 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.97□□□□□ -1.45
CCNA1P78396 uc_338.18-201ENST00000615451 175 ntBASIC5.97□□□□□ -1.45
CCNA1P78396 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.97□□□□□ -1.45
CCNA1P78396 KYNUP3-201ENST00000574386 1341 ntBASIC5.97□□□□□ -1.45
CCNA1P78396 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
CCNA1P78396 AL359715.3-201ENST00000569267 2123 ntBASIC5.96□□□□□ -1.45
CCNA1P78396 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CCNA1P78396 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms