Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MIR320B1-201ENST00000390209 79 ntBASIC6.6□□□□□ -1.35
RHBDL3P58872 ATP5HP3-201ENST00000396994 486 ntBASIC6.6□□□□□ -1.35
RHBDL3P58872 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.6□□□□□ -1.35
RHBDL3P58872 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.6□□□□□ -1.35
RHBDL3P58872 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC6.6□□□□□ -1.35
RHBDL3P58872 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.6□□□□□ -1.35
RHBDL3P58872 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.6□□□□□ -1.35
RHBDL3P58872 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RHBDL3P58872 AL590762.3-201ENST00000436372 640 ntBASIC6.6□□□□□ -1.35
RHBDL3P58872 ELOCP3-201ENST00000439303 348 ntBASIC6.6□□□□□ -1.35
RHBDL3P58872 NANOGP9-201ENST00000439890 892 ntBASIC6.6□□□□□ -1.35
RHBDL3P58872 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.6□□□□□ -1.35
RHBDL3P58872 AC105399.1-202ENST00000447303 205 ntBASIC6.6□□□□□ -1.35
RHBDL3P58872 SBDSP1-204ENST00000453858 737 ntBASIC6.6□□□□□ -1.35
RHBDL3P58872 AC093270.2-201ENST00000486157 792 ntBASIC6.6□□□□□ -1.35
RHBDL3P58872 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.6□□□□□ -1.35
RHBDL3P58872 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.6□□□□□ -1.35
RHBDL3P58872 OR5M14P-201ENST00000506803 618 ntBASIC6.6□□□□□ -1.35
RHBDL3P58872 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.6□□□□□ -1.35
RHBDL3P58872 HIGD1AP18-201ENST00000520730 278 ntBASIC6.6□□□□□ -1.35
RHBDL3P58872 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.6□□□□□ -1.35
RHBDL3P58872 AC044860.2-201ENST00000561005 179 ntBASIC6.6□□□□□ -1.35
RHBDL3P58872 AC079148.1-201ENST00000565944 819 ntBASIC6.6□□□□□ -1.35
RHBDL3P58872 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RHBDL3P58872 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.6□□□□□ -1.35
RHBDL3P58872 AC073137.1-201ENST00000605636 634 ntBASIC6.6□□□□□ -1.35
RHBDL3P58872 AC025175.1-201ENST00000606482 759 ntBASIC6.6□□□□□ -1.35
RHBDL3P58872 AC012557.1-201ENST00000607115 611 ntBASIC6.6□□□□□ -1.35
RHBDL3P58872 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.6□□□□□ -1.35
RHBDL3P58872 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.6□□□□□ -1.35
RHBDL3P58872 AC068870.1-201ENST00000563737 2455 ntBASIC6.6□□□□□ -1.35
RHBDL3P58872 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
RHBDL3P58872 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RHBDL3P58872 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
RHBDL3P58872 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RHBDL3P58872 AC007996.1-201ENST00000620414 2821 ntBASIC6.59□□□□□ -1.35
RHBDL3P58872 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RHBDL3P58872 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
RHBDL3P58872 MRRFP1-201ENST00000435941 1675 ntBASIC6.59□□□□□ -1.35
RHBDL3P58872 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RHBDL3P58872 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RHBDL3P58872 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RHBDL3P58872 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.59□□□□□ -1.35
RHBDL3P58872 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
RHBDL3P58872 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RHBDL3P58872 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RHBDL3P58872 MIR223-201ENST00000385204 110 ntBASIC6.59□□□□□ -1.35
RHBDL3P58872 SNORA40.4-201ENST00000390971 128 ntBASIC6.59□□□□□ -1.35
RHBDL3P58872 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.59□□□□□ -1.35
RHBDL3P58872 RNF10P1-201ENST00000418589 369 ntBASIC6.59□□□□□ -1.35
RHBDL3P58872 RNGTTP1-201ENST00000420965 728 ntBASIC6.59□□□□□ -1.35
RHBDL3P58872 AL133325.1-201ENST00000421090 382 ntBASIC6.59□□□□□ -1.35
RHBDL3P58872 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RHBDL3P58872 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.59□□□□□ -1.35
RHBDL3P58872 GAPDHP58-201ENST00000438477 1006 ntBASIC6.59□□□□□ -1.35
RHBDL3P58872 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.59□□□□□ -1.35
RHBDL3P58872 RPL7P39-201ENST00000481157 744 ntBASIC6.59□□□□□ -1.35
RHBDL3P58872 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RHBDL3P58872 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RHBDL3P58872 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.59□□□□□ -1.35
RHBDL3P58872 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.59□□□□□ -1.35
RHBDL3P58872 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.59□□□□□ -1.35
RHBDL3P58872 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.59□□□□□ -1.35
RHBDL3P58872 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.59□□□□□ -1.35
RHBDL3P58872 ADAD1P2-201ENST00000588476 646 ntBASIC6.59□□□□□ -1.35
RHBDL3P58872 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.59□□□□□ -1.35
RHBDL3P58872 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.59□□□□□ -1.35
RHBDL3P58872 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.59□□□□□ -1.35
RHBDL3P58872 AL512506.1-201ENST00000613918 449 ntBASIC6.59□□□□□ -1.35
RHBDL3P58872 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.59□□□□□ -1.35
RHBDL3P58872 AC245389.2-201ENST00000616023 576 ntBASIC6.59□□□□□ -1.35
RHBDL3P58872 AC242843.1-201ENST00000618702 573 ntBASIC6.59□□□□□ -1.35
RHBDL3P58872 AL445493.3-201ENST00000619568 477 ntBASIC6.59□□□□□ -1.35
RHBDL3P58872 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
RHBDL3P58872 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RHBDL3P58872 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
RHBDL3P58872 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.59□□□□□ -1.36
RHBDL3P58872 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RHBDL3P58872 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
RHBDL3P58872 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
RHBDL3P58872 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RHBDL3P58872 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.58□□□□□ -1.36
RHBDL3P58872 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
RHBDL3P58872 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
RHBDL3P58872 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.58□□□□□ -1.36
RHBDL3P58872 AC133552.1-201ENST00000569988 4007 ntBASIC6.58□□□□□ -1.36
RHBDL3P58872 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RHBDL3P58872 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RHBDL3P58872 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.58□□□□□ -1.36
RHBDL3P58872 GNG5P2-201ENST00000372054 207 ntBASIC6.58□□□□□ -1.36
RHBDL3P58872 SNORA70-201ENST00000384436 135 ntBASIC6.58□□□□□ -1.36
RHBDL3P58872 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.58□□□□□ -1.36
RHBDL3P58872 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.58□□□□□ -1.36
RHBDL3P58872 RN7SKP222-201ENST00000410651 315 ntBASIC6.58□□□□□ -1.36
RHBDL3P58872 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.58□□□□□ -1.36
RHBDL3P58872 ARL2BPP3-201ENST00000421226 480 ntBASIC6.58□□□□□ -1.36
RHBDL3P58872 OR5M12P-201ENST00000423388 929 ntBASIC6.58□□□□□ -1.36
RHBDL3P58872 SRSF1P1-201ENST00000424058 520 ntBASIC6.58□□□□□ -1.36
RHBDL3P58872 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.58□□□□□ -1.36
RHBDL3P58872 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms