Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.01□□□□□ -1.61
VSX2P58304 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VSX2P58304 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.01□□□□□ -1.61
VSX2P58304 AC009597.2-201ENST00000604659 592 ntBASIC5.01□□□□□ -1.61
VSX2P58304 AL162431.4-201ENST00000604674 411 ntBASIC5.01□□□□□ -1.61
VSX2P58304 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.01□□□□□ -1.61
VSX2P58304 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VSX2P58304 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.01□□□□□ -1.61
VSX2P58304 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.01□□□□□ -1.61
VSX2P58304 AC008079.2-201ENST00000623543 20396 ntBASIC5.01□□□□□ -1.61
VSX2P58304 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VSX2P58304 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.01□□□□□ -1.61
VSX2P58304 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.01□□□□□ -1.61
VSX2P58304 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5□□□□□ -1.61
VSX2P58304 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
VSX2P58304 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
VSX2P58304 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5□□□□□ -1.61
VSX2P58304 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5□□□□□ -1.61
VSX2P58304 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
VSX2P58304 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5□□□□□ -1.61
VSX2P58304 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5□□□□□ -1.61
VSX2P58304 RN7SKP153-201ENST00000365026 316 ntBASIC5□□□□□ -1.61
VSX2P58304 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5□□□□□ -1.61
VSX2P58304 OR8V1P-201ENST00000395193 873 ntBASIC5□□□□□ -1.61
VSX2P58304 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5□□□□□ -1.61
VSX2P58304 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5□□□□□ -1.61
VSX2P58304 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5□□□□□ -1.61
VSX2P58304 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5□□□□□ -1.61
VSX2P58304 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5□□□□□ -1.61
VSX2P58304 CLUHP1-201ENST00000435012 1190 ntBASIC5□□□□□ -1.61
VSX2P58304 RPS29P10-201ENST00000439197 166 ntBASIC5□□□□□ -1.61
VSX2P58304 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5□□□□□ -1.61
VSX2P58304 CBX1P5-201ENST00000475330 559 ntBASIC5□□□□□ -1.61
VSX2P58304 SNRPCP2-201ENST00000504370 475 ntBASIC5□□□□□ -1.61
VSX2P58304 AC021193.1-201ENST00000511607 420 ntBASIC5□□□□□ -1.61
VSX2P58304 EIF3KP3-201ENST00000514461 639 ntBASIC5□□□□□ -1.61
VSX2P58304 AC022360.1-201ENST00000521058 340 ntBASIC5□□□□□ -1.61
VSX2P58304 BMPR1APS2-201ENST00000527904 1012 ntBASIC5□□□□□ -1.61
VSX2P58304 AC022832.1-201ENST00000530718 645 ntBASIC5□□□□□ -1.61
VSX2P58304 AC134349.2-201ENST00000535136 910 ntBASIC5□□□□□ -1.61
VSX2P58304 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5□□□□□ -1.61
VSX2P58304 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5□□□□□ -1.61
VSX2P58304 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5□□□□□ -1.61
VSX2P58304 AC119501.1-201ENST00000603646 475 ntBASIC5□□□□□ -1.61
VSX2P58304 AL021707.7-201ENST00000607991 416 ntBASIC5□□□□□ -1.61
VSX2P58304 AL139407.1-201ENST00000613826 1175 ntBASIC5□□□□□ -1.61
VSX2P58304 AC018445.2-201ENST00000622987 260 ntBASIC5□□□□□ -1.61
VSX2P58304 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5□□□□□ -1.61
VSX2P58304 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5□□□□□ -1.61
VSX2P58304 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VSX2P58304 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5□□□□□ -1.61
VSX2P58304 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
VSX2P58304 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VSX2P58304 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
VSX2P58304 AC019072.1-201ENST00000604535 1551 ntBASIC4.99□□□□□ -1.61
VSX2P58304 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.99□□□□□ -1.61
VSX2P58304 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VSX2P58304 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
VSX2P58304 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.99□□□□□ -1.61
VSX2P58304 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VSX2P58304 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
VSX2P58304 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VSX2P58304 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
VSX2P58304 U3.3-201ENST00000362986 216 ntBASIC4.99□□□□□ -1.61
VSX2P58304 U8.4-201ENST00000363626 134 ntBASIC4.99□□□□□ -1.61
VSX2P58304 RNA5SP90-201ENST00000364801 99 ntBASIC4.99□□□□□ -1.61
VSX2P58304 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.99□□□□□ -1.61
VSX2P58304 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VSX2P58304 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VSX2P58304 AC211486.3-201ENST00000412694 621 ntBASIC4.99□□□□□ -1.61
VSX2P58304 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.99□□□□□ -1.61
VSX2P58304 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.99□□□□□ -1.61
VSX2P58304 NOP56P2-201ENST00000447491 769 ntBASIC4.99□□□□□ -1.61
VSX2P58304 SEPT7P3-201ENST00000455017 621 ntBASIC4.99□□□□□ -1.61
VSX2P58304 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.99□□□□□ -1.61
VSX2P58304 RN7SL189P-201ENST00000468631 289 ntBASIC4.99□□□□□ -1.61
VSX2P58304 AP000797.2-201ENST00000475768 606 ntBASIC4.99□□□□□ -1.61
VSX2P58304 RPSAP50-201ENST00000481955 852 ntBASIC4.99□□□□□ -1.61
VSX2P58304 RPS24P16-201ENST00000497294 392 ntBASIC4.99□□□□□ -1.61
VSX2P58304 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.99□□□□□ -1.61
VSX2P58304 AC147055.3-201ENST00000510547 851 ntBASIC4.99□□□□□ -1.61
VSX2P58304 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.99□□□□□ -1.61
VSX2P58304 SEPT10P1-201ENST00000517342 1162 ntBASIC4.99□□□□□ -1.61
VSX2P58304 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.99□□□□□ -1.61
VSX2P58304 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.99□□□□□ -1.61
VSX2P58304 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.99□□□□□ -1.61
VSX2P58304 LSM3P2-201ENST00000551246 273 ntBASIC4.99□□□□□ -1.61
VSX2P58304 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VSX2P58304 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.99□□□□□ -1.61
VSX2P58304 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VSX2P58304 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.99□□□□□ -1.61
VSX2P58304 RPSAP73-201ENST00000614820 330 ntBASIC4.99□□□□□ -1.61
VSX2P58304 MTCO1P1-201ENST00000624263 1081 ntBASIC4.99□□□□□ -1.61
VSX2P58304 AC135068.12-201ENST00000637370 931 ntBASIC4.99□□□□□ -1.61
VSX2P58304 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
VSX2P58304 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.99□□□□□ -1.61
VSX2P58304 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.99□□□□□ -1.61
VSX2P58304 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VSX2P58304 AC114947.2-201ENST00000565748 2125 ntBASIC4.99□□□□□ -1.61
VSX2P58304 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms