Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 TMEM161BP1-201ENST00000457388 1457 ntBASIC6□□□□□ -1.45
CACNA2D1P54289 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6□□□□□ -1.45
CACNA2D1P54289 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CACNA2D1P54289 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6□□□□□ -1.45
CACNA2D1P54289 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6□□□□□ -1.45
CACNA2D1P54289 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CACNA2D1P54289 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6□□□□□ -1.45
CACNA2D1P54289 BCORP1-203ENST00000513194 5093 ntBASIC6□□□□□ -1.45
CACNA2D1P54289 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6□□□□□ -1.45
CACNA2D1P54289 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6□□□□□ -1.45
CACNA2D1P54289 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CACNA2D1P54289 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CACNA2D1P54289 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CACNA2D1P54289 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CACNA2D1P54289 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CACNA2D1P54289 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CACNA2D1P54289 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.99□□□□□ -1.45
CACNA2D1P54289 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CACNA2D1P54289 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CACNA2D1P54289 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CACNA2D1P54289 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CACNA2D1P54289 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.99□□□□□ -1.45
CACNA2D1P54289 AP002530.1-201ENST00000405705 684 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 AC113412.1-201ENST00000425840 504 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.99□□□□□ -1.45
CACNA2D1P54289 AC006335.2-201ENST00000437993 330 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.99□□□□□ -1.45
CACNA2D1P54289 AL591719.1-201ENST00000444669 744 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 AC087672.1-201ENST00000479876 766 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.99□□□□□ -1.45
CACNA2D1P54289 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.99□□□□□ -1.45
CACNA2D1P54289 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.99□□□□□ -1.45
CACNA2D1P54289 RN7SL466P-201ENST00000497546 295 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CACNA2D1P54289 AC020699.1-201ENST00000505161 445 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 DUTP7-201ENST00000507982 486 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CACNA2D1P54289 AC011411.1-201ENST00000509592 876 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 AC074255.1-201ENST00000511259 501 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.99□□□□□ -1.45
CACNA2D1P54289 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CACNA2D1P54289 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.99□□□□□ -1.45
CACNA2D1P54289 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.99□□□□□ -1.45
CACNA2D1P54289 MIR4509-3-201ENST00000578671 94 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.99□□□□□ -1.45
CACNA2D1P54289 MIR4509-2-201ENST00000583920 94 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.99□□□□□ -1.45
CACNA2D1P54289 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CACNA2D1P54289 MIR4509-1-201ENST00000618224 94 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 AC074276.2-201ENST00000619891 348 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 AL035661.1-201ENST00000620459 1144 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.99□□□□□ -1.45
CACNA2D1P54289 AL590396.4-201ENST00000636779 956 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CACNA2D1P54289 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CACNA2D1P54289 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
CACNA2D1P54289 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CACNA2D1P54289 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CACNA2D1P54289 MTCO1P11-201ENST00000429111 1528 ntBASIC5.99□□□□□ -1.45
CACNA2D1P54289 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CACNA2D1P54289 PWAR1-201ENST00000624188 2414 ntBASIC5.98□□□□□ -1.45
CACNA2D1P54289 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CACNA2D1P54289 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 RN7SKP229-201ENST00000410465 302 ntBASIC5.98□□□□□ -1.45
CACNA2D1P54289 VN1R51P-201ENST00000411675 945 ntBASIC5.98□□□□□ -1.45
CACNA2D1P54289 OR2AT2P-201ENST00000413438 905 ntBASIC5.98□□□□□ -1.45
CACNA2D1P54289 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 CRIP1P1-201ENST00000427567 185 ntBASIC5.98□□□□□ -1.45
CACNA2D1P54289 RPL12P28-201ENST00000430852 489 ntBASIC5.98□□□□□ -1.45
CACNA2D1P54289 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 SUMO2P1-206ENST00000445436 284 ntBASIC5.98□□□□□ -1.45
CACNA2D1P54289 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CACNA2D1P54289 AC020898.1-201ENST00000474167 787 ntBASIC5.98□□□□□ -1.45
CACNA2D1P54289 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 RPL23AP73-201ENST00000492507 471 ntBASIC5.98□□□□□ -1.45
CACNA2D1P54289 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 AP003355.1-201ENST00000518956 587 ntBASIC5.98□□□□□ -1.45
CACNA2D1P54289 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 IGBP1P1-201ENST00000554337 1009 ntBASIC5.98□□□□□ -1.45
CACNA2D1P54289 AL049872.1-201ENST00000556323 322 ntBASIC5.98□□□□□ -1.45
CACNA2D1P54289 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CACNA2D1P54289 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 AL513327.3-201ENST00000602618 469 ntBASIC5.98□□□□□ -1.45
CACNA2D1P54289 AL589674.2-201ENST00000604304 337 ntBASIC5.98□□□□□ -1.45
CACNA2D1P54289 AL512624.1-201ENST00000613638 469 ntBASIC5.98□□□□□ -1.45
CACNA2D1P54289 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.98□□□□□ -1.45
CACNA2D1P54289 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.98□□□□□ -1.45
CACNA2D1P54289 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms