Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC245060.4-201ENST00000413293 1121 ntBASIC5.99□□□□□ -1.45
COPB1P53618 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
COPB1P53618 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.99□□□□□ -1.45
COPB1P53618 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COPB1P53618 AC066692.1-201ENST00000421721 457 ntBASIC5.99□□□□□ -1.45
COPB1P53618 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COPB1P53618 MORF4L1P7-201ENST00000426038 703 ntBASIC5.99□□□□□ -1.45
COPB1P53618 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.99□□□□□ -1.45
COPB1P53618 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.99□□□□□ -1.45
COPB1P53618 AC098826.2-201ENST00000452011 651 ntBASIC5.99□□□□□ -1.45
COPB1P53618 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
COPB1P53618 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COPB1P53618 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.99□□□□□ -1.45
COPB1P53618 ACA64.1-201ENST00000459171 127 ntBASIC5.99□□□□□ -1.45
COPB1P53618 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.99□□□□□ -1.45
COPB1P53618 UBE2V1P12-201ENST00000503954 474 ntBASIC5.99□□□□□ -1.45
COPB1P53618 NPM1P52-201ENST00000518264 846 ntBASIC5.99□□□□□ -1.45
COPB1P53618 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
COPB1P53618 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.99□□□□□ -1.45
COPB1P53618 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
COPB1P53618 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.99□□□□□ -1.45
COPB1P53618 MTND2P17-201ENST00000550281 688 ntBASIC5.99□□□□□ -1.45
COPB1P53618 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.99□□□□□ -1.45
COPB1P53618 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.99□□□□□ -1.45
COPB1P53618 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.99□□□□□ -1.45
COPB1P53618 MIR4660-201ENST00000583549 74 ntBASIC5.99□□□□□ -1.45
COPB1P53618 AL357094.1-201ENST00000603845 844 ntBASIC5.99□□□□□ -1.45
COPB1P53618 AC108865.2-201ENST00000606881 432 ntBASIC5.99□□□□□ -1.45
COPB1P53618 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.99□□□□□ -1.45
COPB1P53618 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.99□□□□□ -1.45
COPB1P53618 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.99□□□□□ -1.45
COPB1P53618 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.99□□□□□ -1.45
COPB1P53618 FRG1EP-201ENST00000634469 770 ntBASIC5.99□□□□□ -1.45
COPB1P53618 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
COPB1P53618 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
COPB1P53618 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.99□□□□□ -1.45
COPB1P53618 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
COPB1P53618 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COPB1P53618 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COPB1P53618 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COPB1P53618 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
COPB1P53618 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
COPB1P53618 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
COPB1P53618 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COPB1P53618 RNA5SP394-201ENST00000364216 119 ntBASIC5.98□□□□□ -1.45
COPB1P53618 MIR421-201ENST00000365696 85 ntBASIC5.98□□□□□ -1.45
COPB1P53618 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COPB1P53618 OR1L6-202ENST00000373684 1044 ntBASIC5.98□□□□□ -1.45
COPB1P53618 RNU6-1257P-201ENST00000384625 110 ntBASIC5.98□□□□□ -1.45
COPB1P53618 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
COPB1P53618 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.98□□□□□ -1.45
COPB1P53618 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.98□□□□□ -1.45
COPB1P53618 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.98□□□□□ -1.45
COPB1P53618 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.98□□□□□ -1.45
COPB1P53618 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.98□□□□□ -1.45
COPB1P53618 HSPD1P12-201ENST00000429127 1069 ntBASIC5.98□□□□□ -1.45
COPB1P53618 RPL19P16-201ENST00000433839 588 ntBASIC5.98□□□□□ -1.45
COPB1P53618 AC007000.2-201ENST00000442564 487 ntBASIC5.98□□□□□ -1.45
COPB1P53618 AC016772.1-201ENST00000444170 1261 ntBASIC5.98□□□□□ -1.45
COPB1P53618 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.98□□□□□ -1.45
COPB1P53618 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.98□□□□□ -1.45
COPB1P53618 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.98□□□□□ -1.45
COPB1P53618 OR52E3P-201ENST00000452083 936 ntBASIC5.98□□□□□ -1.45
COPB1P53618 VDAC2P4-201ENST00000452925 711 ntBASIC5.98□□□□□ -1.45
COPB1P53618 RPEP1-201ENST00000504507 658 ntBASIC5.98□□□□□ -1.45
COPB1P53618 AC106872.4-201ENST00000510050 523 ntBASIC5.98□□□□□ -1.45
COPB1P53618 IMPA1P1-201ENST00000510718 842 ntBASIC5.98□□□□□ -1.45
COPB1P53618 RNU6-615P-201ENST00000516065 106 ntBASIC5.98□□□□□ -1.45
COPB1P53618 RNA5SP230-201ENST00000517039 122 ntBASIC5.98□□□□□ -1.45
COPB1P53618 SNORA76.2-201ENST00000517095 137 ntBASIC5.98□□□□□ -1.45
COPB1P53618 RNU6-889P-201ENST00000517189 103 ntBASIC5.98□□□□□ -1.45
COPB1P53618 SEC11B-201ENST00000518383 499 ntBASIC5.98□□□□□ -1.45
COPB1P53618 GTF2IP11-201ENST00000526931 420 ntBASIC5.98□□□□□ -1.45
COPB1P53618 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.98□□□□□ -1.45
COPB1P53618 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COPB1P53618 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.98□□□□□ -1.45
COPB1P53618 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.98□□□□□ -1.45
COPB1P53618 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
COPB1P53618 AC011445.2-201ENST00000599274 173 ntBASIC5.98□□□□□ -1.45
COPB1P53618 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.98□□□□□ -1.45
COPB1P53618 AC004908.3-201ENST00000610248 625 ntBASIC5.98□□□□□ -1.45
COPB1P53618 AC244107.2-201ENST00000611773 76 ntBASIC5.98□□□□□ -1.45
COPB1P53618 AC068880.4-201ENST00000623082 495 ntBASIC5.98□□□□□ -1.45
COPB1P53618 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.98□□□□□ -1.45
COPB1P53618 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.98□□□□□ -1.45
COPB1P53618 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.98□□□□□ -1.45
COPB1P53618 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.98□□□□□ -1.45
COPB1P53618 TMEM30CP-203ENST00000637814 1035 ntBASIC5.98□□□□□ -1.45
COPB1P53618 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.98□□□□□ -1.45
COPB1P53618 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COPB1P53618 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
COPB1P53618 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
COPB1P53618 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COPB1P53618 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COPB1P53618 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.98□□□□□ -1.45
COPB1P53618 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
COPB1P53618 LINC01963-201ENST00000562038 3148 ntBASIC5.97□□□□□ -1.45
COPB1P53618 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
COPB1P53618 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COPB1P53618 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms