Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC091390.3-201ENST00000426478 338 ntBASIC5.35□□□□□ -1.55
HTTP42858 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.35□□□□□ -1.55
HTTP42858 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC5.35□□□□□ -1.55
HTTP42858 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.35□□□□□ -1.55
HTTP42858 HNRNPCP4-201ENST00000571636 900 ntBASIC5.35□□□□□ -1.55
HTTP42858 AF131215.7-201ENST00000602443 707 ntBASIC5.35□□□□□ -1.55
HTTP42858 uc_338.7-201ENST00000621834 124 ntBASIC5.35□□□□□ -1.55
HTTP42858 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
HTTP42858 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HTTP42858 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.35□□□□□ -1.55
HTTP42858 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.35□□□□□ -1.55
HTTP42858 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HTTP42858 SNORA63.1-201ENST00000362493 131 ntBASIC5.34□□□□□ -1.55
HTTP42858 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.34□□□□□ -1.55
HTTP42858 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.34□□□□□ -1.55
HTTP42858 RPL19P16-201ENST00000433839 588 ntBASIC5.34□□□□□ -1.55
HTTP42858 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.34□□□□□ -1.55
HTTP42858 snoU13.24-201ENST00000458998 104 ntBASIC5.34□□□□□ -1.55
HTTP42858 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.34□□□□□ -1.55
HTTP42858 AC022360.1-201ENST00000521058 340 ntBASIC5.34□□□□□ -1.55
HTTP42858 AC023043.4-201ENST00000612081 449 ntBASIC5.34□□□□□ -1.55
HTTP42858 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HTTP42858 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.34□□□□□ -1.55
HTTP42858 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
HTTP42858 OR56B2P-202ENST00000641377 2453 ntBASIC5.34□□□□□ -1.55
HTTP42858 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
HTTP42858 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HTTP42858 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.34□□□□□ -1.55
HTTP42858 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HTTP42858 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HTTP42858 AL161909.1-201ENST00000397390 712 ntBASIC5.34□□□□□ -1.55
HTTP42858 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.34□□□□□ -1.55
HTTP42858 NDUFB4P8-201ENST00000435351 367 ntBASIC5.34□□□□□ -1.55
HTTP42858 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.34□□□□□ -1.55
HTTP42858 AL450023.3-201ENST00000440592 271 ntBASIC5.34□□□□□ -1.55
HTTP42858 AC020890.1-201ENST00000491837 504 ntBASIC5.34□□□□□ -1.55
HTTP42858 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.34□□□□□ -1.55
HTTP42858 AC108475.1-201ENST00000507880 950 ntBASIC5.34□□□□□ -1.55
HTTP42858 OR4A2P-201ENST00000527276 913 ntBASIC5.34□□□□□ -1.55
HTTP42858 AP005901.4-201ENST00000577336 569 ntBASIC5.34□□□□□ -1.55
HTTP42858 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.34□□□□□ -1.55
HTTP42858 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HTTP42858 MIR8059-201ENST00000620427 81 ntBASIC5.34□□□□□ -1.55
HTTP42858 AC091953.5-201ENST00000622919 233 ntBASIC5.34□□□□□ -1.55
HTTP42858 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.34□□□□□ -1.55
HTTP42858 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HTTP42858 AC090017.1-201ENST00000548612 1779 ntBASIC5.34□□□□□ -1.55
HTTP42858 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.34□□□□□ -1.55
HTTP42858 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
HTTP42858 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
HTTP42858 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
HTTP42858 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC5.34□□□□□ -1.56
HTTP42858 RNU6-525P-201ENST00000363685 104 ntBASIC5.34□□□□□ -1.56
HTTP42858 AL117339.2-201ENST00000430475 180 ntBASIC5.34□□□□□ -1.56
HTTP42858 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.34□□□□□ -1.56
HTTP42858 AC060780.2-201ENST00000589047 198 ntBASIC5.34□□□□□ -1.56
HTTP42858 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.34□□□□□ -1.56
HTTP42858 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
HTTP42858 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC5.34□□□□□ -1.56
HTTP42858 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.34□□□□□ -1.56
HTTP42858 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
HTTP42858 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HTTP42858 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HTTP42858 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HTTP42858 VN2R3P-201ENST00000422626 1412 ntBASIC5.33□□□□□ -1.56
HTTP42858 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HTTP42858 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HTTP42858 RPL23AP26-201ENST00000412728 464 ntBASIC5.33□□□□□ -1.56
HTTP42858 AC245028.2-201ENST00000458673 253 ntBASIC5.33□□□□□ -1.56
HTTP42858 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.33□□□□□ -1.56
HTTP42858 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.33□□□□□ -1.56
HTTP42858 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HTTP42858 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HTTP42858 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HTTP42858 FBN2-208ENST00000619499 10154 ntTSL 5 BASIC5.33□□□□□ -1.56
HTTP42858 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HTTP42858 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HTTP42858 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HTTP42858 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HTTP42858 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.33□□□□□ -1.56
HTTP42858 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.33□□□□□ -1.56
HTTP42858 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.33□□□□□ -1.56
HTTP42858 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.33□□□□□ -1.56
HTTP42858 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.33□□□□□ -1.56
HTTP42858 RN7SL558P-201ENST00000497468 299 ntBASIC5.33□□□□□ -1.56
HTTP42858 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.33□□□□□ -1.56
HTTP42858 AL139124.1-201ENST00000609123 421 ntBASIC5.33□□□□□ -1.56
HTTP42858 AC018816.2-201ENST00000621460 353 ntBASIC5.33□□□□□ -1.56
HTTP42858 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HTTP42858 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HTTP42858 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.33□□□□□ -1.56
HTTP42858 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HTTP42858 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.33□□□□□ -1.56
HTTP42858 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HTTP42858 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HTTP42858 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HTTP42858 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HTTP42858 OR5P1P-201ENST00000299512 925 ntBASIC5.32□□□□□ -1.56
HTTP42858 FTH1P16-201ENST00000435241 552 ntBASIC5.32□□□□□ -1.56
HTTP42858 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms