Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SNORD56.6-201ENST00000384569 71 ntBASIC4.89□□□□□ -1.63
RFC3P40938 HSPA8P15-201ENST00000401676 786 ntBASIC4.89□□□□□ -1.63
RFC3P40938 AC002524.1-201ENST00000411687 547 ntBASIC4.89□□□□□ -1.63
RFC3P40938 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.89□□□□□ -1.63
RFC3P40938 AC006455.6-201ENST00000426192 893 ntBASIC4.89□□□□□ -1.63
RFC3P40938 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.89□□□□□ -1.63
RFC3P40938 AC005033.1-201ENST00000428904 813 ntBASIC4.89□□□□□ -1.63
RFC3P40938 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.89□□□□□ -1.63
RFC3P40938 AC104634.1-201ENST00000452720 462 ntBASIC4.89□□□□□ -1.63
RFC3P40938 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.89□□□□□ -1.63
RFC3P40938 TPT1P1-201ENST00000458495 518 ntBASIC4.89□□□□□ -1.63
RFC3P40938 RPL7AP6-201ENST00000477943 801 ntBASIC4.89□□□□□ -1.63
RFC3P40938 AC004453.1-201ENST00000487895 408 ntBASIC4.89□□□□□ -1.63
RFC3P40938 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.89□□□□□ -1.63
RFC3P40938 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.89□□□□□ -1.63
RFC3P40938 OR8G3P-201ENST00000533406 921 ntBASIC4.89□□□□□ -1.63
RFC3P40938 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.89□□□□□ -1.63
RFC3P40938 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.89□□□□□ -1.63
RFC3P40938 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.89□□□□□ -1.63
RFC3P40938 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.89□□□□□ -1.63
RFC3P40938 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.89□□□□□ -1.63
RFC3P40938 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.89□□□□□ -1.63
RFC3P40938 NMNAT1P5-201ENST00000559657 841 ntBASIC4.89□□□□□ -1.63
RFC3P40938 AC005341.1-201ENST00000571086 708 ntBASIC4.89□□□□□ -1.63
RFC3P40938 AP002884.5-201ENST00000595053 1132 ntBASIC4.89□□□□□ -1.63
RFC3P40938 AC074101.1-201ENST00000637861 241 ntBASIC4.89□□□□□ -1.63
RFC3P40938 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.89□□□□□ -1.63
RFC3P40938 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RFC3P40938 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RFC3P40938 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RFC3P40938 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFC3P40938 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
RFC3P40938 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFC3P40938 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
RFC3P40938 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.88□□□□□ -1.63
RFC3P40938 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFC3P40938 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
RFC3P40938 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFC3P40938 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFC3P40938 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFC3P40938 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFC3P40938 MIR765-201ENST00000390226 114 ntBASIC4.88□□□□□ -1.63
RFC3P40938 AL645927.1-201ENST00000396783 406 ntBASIC4.88□□□□□ -1.63
RFC3P40938 RNA5SP296-201ENST00000410523 111 ntBASIC4.88□□□□□ -1.63
RFC3P40938 RN7SKP126-201ENST00000411143 300 ntBASIC4.88□□□□□ -1.63
RFC3P40938 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.88□□□□□ -1.63
RFC3P40938 RIMKLBP2-201ENST00000424737 654 ntBASIC4.88□□□□□ -1.63
RFC3P40938 RPL12P3-201ENST00000440080 396 ntBASIC4.88□□□□□ -1.63
RFC3P40938 AC012512.1-201ENST00000446594 718 ntBASIC4.88□□□□□ -1.63
RFC3P40938 MTND6P5-201ENST00000448266 512 ntBASIC4.88□□□□□ -1.63
RFC3P40938 OTX2P1-201ENST00000450956 354 ntBASIC4.88□□□□□ -1.63
RFC3P40938 OR11I1P-201ENST00000486033 954 ntBASIC4.88□□□□□ -1.63
RFC3P40938 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.88□□□□□ -1.63
RFC3P40938 ENPP7P11-201ENST00000505915 627 ntBASIC4.88□□□□□ -1.63
RFC3P40938 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.88□□□□□ -1.63
RFC3P40938 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.88□□□□□ -1.63
RFC3P40938 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.88□□□□□ -1.63
RFC3P40938 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.88□□□□□ -1.63
RFC3P40938 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.88□□□□□ -1.63
RFC3P40938 AC008536.1-201ENST00000602872 669 ntBASIC4.88□□□□□ -1.63
RFC3P40938 AL161912.3-201ENST00000605404 628 ntBASIC4.88□□□□□ -1.63
RFC3P40938 AC024940.4-201ENST00000605507 246 ntBASIC4.88□□□□□ -1.63
RFC3P40938 AL122125.1-201ENST00000616999 600 ntBASIC4.88□□□□□ -1.63
RFC3P40938 WBP1LP8-201ENST00000617401 327 ntBASIC4.88□□□□□ -1.63
RFC3P40938 AP003072.5-201ENST00000623872 773 ntBASIC4.88□□□□□ -1.63
RFC3P40938 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RFC3P40938 CASC19-222ENST00000641321 1173 ntBASIC4.88□□□□□ -1.63
RFC3P40938 AC073869.8-201ENST00000641806 335 ntBASIC4.88□□□□□ -1.63
RFC3P40938 AC025574.1-201ENST00000554784 1653 ntBASIC4.88□□□□□ -1.63
RFC3P40938 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFC3P40938 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFC3P40938 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.88□□□□□ -1.63
RFC3P40938 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
RFC3P40938 AC073136.1-201ENST00000449426 2884 ntBASIC4.88□□□□□ -1.63
RFC3P40938 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFC3P40938 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.88□□□□□ -1.63
RFC3P40938 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.88□□□□□ -1.63
RFC3P40938 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFC3P40938 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RFC3P40938 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.88□□□□□ -1.63
RFC3P40938 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
RFC3P40938 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFC3P40938 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RFC3P40938 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFC3P40938 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RFC3P40938 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RFC3P40938 AC007342.5-201ENST00000571340 2142 ntBASIC4.87□□□□□ -1.63
RFC3P40938 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.87□□□□□ -1.63
RFC3P40938 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RFC3P40938 MIR937-201ENST00000401271 86 ntBASIC4.87□□□□□ -1.63
RFC3P40938 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.87□□□□□ -1.63
RFC3P40938 SMC4P1-201ENST00000414479 527 ntBASIC4.87□□□□□ -1.63
RFC3P40938 HYALP1-201ENST00000417674 1279 ntBASIC4.87□□□□□ -1.63
RFC3P40938 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.87□□□□□ -1.63
RFC3P40938 RPS11P7-201ENST00000442125 465 ntBASIC4.87□□□□□ -1.63
RFC3P40938 SBDSP1-204ENST00000453858 737 ntBASIC4.87□□□□□ -1.63
RFC3P40938 AC009127.1-201ENST00000467090 155 ntBASIC4.87□□□□□ -1.63
RFC3P40938 BX284632.1-201ENST00000478218 541 ntBASIC4.87□□□□□ -1.63
RFC3P40938 RN7SL591P-201ENST00000496150 292 ntBASIC4.87□□□□□ -1.63
RFC3P40938 KATNBL1P4-201ENST00000503545 918 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms