Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.28□□□□□ -1.56
FDFT1P37268 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.28□□□□□ -1.56
FDFT1P37268 AL157385.1-201ENST00000446973 268 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 RPS4XP20-201ENST00000505751 772 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.28□□□□□ -1.56
FDFT1P37268 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.28□□□□□ -1.56
FDFT1P37268 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.28□□□□□ -1.56
FDFT1P37268 MTATP6P1-201ENST00000514057 681 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 AP006245.2-201ENST00000522004 300 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.28□□□□□ -1.56
FDFT1P37268 AC027026.1-201ENST00000532323 742 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
FDFT1P37268 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
FDFT1P37268 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.28□□□□□ -1.56
FDFT1P37268 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.28□□□□□ -1.56
FDFT1P37268 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.28□□□□□ -1.56
FDFT1P37268 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.28□□□□□ -1.56
FDFT1P37268 BNIP3P35-201ENST00000604530 490 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.28□□□□□ -1.56
FDFT1P37268 MIR6861-201ENST00000618657 64 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 AC005840.5-201ENST00000619166 599 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 BX005214.3-202ENST00000619809 325 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 AP001962.1-201ENST00000624114 559 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.28□□□□□ -1.56
FDFT1P37268 SNORA17.5-201ENST00000630429 132 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 CYP4F35P-202ENST00000636121 390 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
FDFT1P37268 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
FDFT1P37268 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
FDFT1P37268 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
FDFT1P37268 AC004817.4-201ENST00000602396 3625 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
FDFT1P37268 HCFC2P1-201ENST00000392864 1592 ntBASIC5.28□□□□□ -1.56
FDFT1P37268 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
FDFT1P37268 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.28□□□□□ -1.56
FDFT1P37268 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
FDFT1P37268 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
FDFT1P37268 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
FDFT1P37268 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
FDFT1P37268 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.27□□□□□ -1.57
FDFT1P37268 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
FDFT1P37268 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
FDFT1P37268 SNORA67-201ENST00000384423 137 ntBASIC5.27□□□□□ -1.57
FDFT1P37268 RAB5CP1-201ENST00000395972 580 ntBASIC5.27□□□□□ -1.57
FDFT1P37268 NUDT19P3-201ENST00000404698 555 ntBASIC5.27□□□□□ -1.57
FDFT1P37268 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.27□□□□□ -1.57
FDFT1P37268 RN7SKP16-201ENST00000410180 299 ntBASIC5.27□□□□□ -1.57
FDFT1P37268 AC104333.2-201ENST00000422630 192 ntBASIC5.27□□□□□ -1.57
FDFT1P37268 AC244033.1-201ENST00000426826 870 ntBASIC5.27□□□□□ -1.57
FDFT1P37268 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.27□□□□□ -1.57
FDFT1P37268 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.27□□□□□ -1.57
FDFT1P37268 OR52E7P-201ENST00000452394 933 ntBASIC5.27□□□□□ -1.57
FDFT1P37268 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
FDFT1P37268 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
FDFT1P37268 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.27□□□□□ -1.57
FDFT1P37268 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.27□□□□□ -1.57
FDFT1P37268 GTF2F2P1-201ENST00000511083 675 ntBASIC5.27□□□□□ -1.57
FDFT1P37268 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.27□□□□□ -1.57
FDFT1P37268 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.27□□□□□ -1.57
FDFT1P37268 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.27□□□□□ -1.57
FDFT1P37268 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.27□□□□□ -1.57
FDFT1P37268 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.27□□□□□ -1.57
FDFT1P37268 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
FDFT1P37268 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
FDFT1P37268 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.27□□□□□ -1.57
FDFT1P37268 AC007204.2-201ENST00000615022 616 ntBASIC5.27□□□□□ -1.57
FDFT1P37268 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
FDFT1P37268 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.27□□□□□ -1.57
FDFT1P37268 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
FDFT1P37268 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.27□□□□□ -1.57
FDFT1P37268 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
FDFT1P37268 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
FDFT1P37268 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
FDFT1P37268 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
FDFT1P37268 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.26□□□□□ -1.57
FDFT1P37268 AP001642.1-201ENST00000624727 2117 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.26□□□□□ -1.57
FDFT1P37268 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
FDFT1P37268 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
FDFT1P37268 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
FDFT1P37268 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.26□□□□□ -1.57
FDFT1P37268 EI24P3-201ENST00000399046 1062 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.26□□□□□ -1.57
FDFT1P37268 RPS4XP16-201ENST00000427198 791 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 AC104843.2-201ENST00000427666 297 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 COX6CP13-201ENST00000428703 226 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 SNRPFP2-201ENST00000440710 251 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.26□□□□□ -1.57
FDFT1P37268 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.26□□□□□ -1.57
FDFT1P37268 VN1R96P-201ENST00000446052 858 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 SEPT7P3-201ENST00000455017 621 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 Z92846.1-201ENST00000456203 268 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 RPSAP39-201ENST00000467439 883 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.26□□□□□ -1.57
FDFT1P37268 RN7SL717P-201ENST00000478343 297 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 RN7SL184P-201ENST00000488308 297 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 AC005412.2-201ENST00000492004 341 ntBASIC5.26□□□□□ -1.57
FDFT1P37268 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.26□□□□□ -1.57
FDFT1P37268 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.26□□□□□ -1.57
FDFT1P37268 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms