Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RFC4P35249 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.51□□□□□ -1.37
RFC4P35249 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.51□□□□□ -1.37
RFC4P35249 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.5□□□□□ -1.37
RFC4P35249 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RFC4P35249 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RFC4P35249 NCOA4P2-201ENST00000340589 1813 ntBASIC6.5□□□□□ -1.37
RFC4P35249 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
RFC4P35249 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
RFC4P35249 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.5□□□□□ -1.37
RFC4P35249 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RFC4P35249 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
RFC4P35249 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RFC4P35249 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RFC4P35249 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RFC4P35249 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
RFC4P35249 RNU4-64P-201ENST00000410795 131 ntBASIC6.5□□□□□ -1.37
RFC4P35249 AC069213.2-201ENST00000420238 366 ntBASIC6.5□□□□□ -1.37
RFC4P35249 SETP9-201ENST00000423837 832 ntBASIC6.5□□□□□ -1.37
RFC4P35249 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.5□□□□□ -1.37
RFC4P35249 RPL7P11-201ENST00000437586 658 ntBASIC6.5□□□□□ -1.37
RFC4P35249 H3F3BP1-201ENST00000440551 403 ntBASIC6.5□□□□□ -1.37
RFC4P35249 CYCSP42-201ENST00000450823 238 ntBASIC6.5□□□□□ -1.37
RFC4P35249 RPS23P7-201ENST00000466210 444 ntBASIC6.5□□□□□ -1.37
RFC4P35249 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.5□□□□□ -1.37
RFC4P35249 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.5□□□□□ -1.37
RFC4P35249 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.5□□□□□ -1.37
RFC4P35249 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.5□□□□□ -1.37
RFC4P35249 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.5□□□□□ -1.37
RFC4P35249 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.5□□□□□ -1.37
RFC4P35249 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.5□□□□□ -1.37
RFC4P35249 MIR5096-201ENST00000583713 70 ntBASIC6.5□□□□□ -1.37
RFC4P35249 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.5□□□□□ -1.37
RFC4P35249 AL353684.1-201ENST00000622677 1120 ntBASIC6.5□□□□□ -1.37
RFC4P35249 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RFC4P35249 AC069542.2-201ENST00000624816 216 ntBASIC6.5□□□□□ -1.37
RFC4P35249 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RFC4P35249 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.5□□□□□ -1.37
RFC4P35249 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RFC4P35249 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RFC4P35249 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.5□□□□□ -1.37
RFC4P35249 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.5□□□□□ -1.37
RFC4P35249 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RFC4P35249 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RFC4P35249 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFC4P35249 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFC4P35249 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFC4P35249 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFC4P35249 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.49□□□□□ -1.37
RFC4P35249 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
RFC4P35249 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.49□□□□□ -1.37
RFC4P35249 AC079097.1-201ENST00000512187 1399 ntBASIC6.49□□□□□ -1.37
RFC4P35249 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.49□□□□□ -1.37
RFC4P35249 RNA5SP191-201ENST00000362585 102 ntBASIC6.49□□□□□ -1.37
RFC4P35249 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFC4P35249 PPIAP9-201ENST00000403866 498 ntBASIC6.49□□□□□ -1.37
RFC4P35249 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFC4P35249 MTND4LP17-201ENST00000414607 293 ntBASIC6.49□□□□□ -1.37
RFC4P35249 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.49□□□□□ -1.37
RFC4P35249 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.49□□□□□ -1.37
RFC4P35249 KRT8P51-201ENST00000438938 274 ntBASIC6.49□□□□□ -1.37
RFC4P35249 BX679664.2-201ENST00000439282 283 ntBASIC6.49□□□□□ -1.37
RFC4P35249 RBMY2TP-201ENST00000451162 947 ntBASIC6.49□□□□□ -1.37
RFC4P35249 snoU13.1-201ENST00000459157 104 ntBASIC6.49□□□□□ -1.37
RFC4P35249 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.49□□□□□ -1.37
RFC4P35249 IGBP1P5-201ENST00000507524 1000 ntBASIC6.49□□□□□ -1.37
RFC4P35249 MRPS33P2-201ENST00000507850 322 ntBASIC6.49□□□□□ -1.37
RFC4P35249 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.49□□□□□ -1.37
RFC4P35249 PARP1P2-201ENST00000556806 195 ntBASIC6.49□□□□□ -1.37
RFC4P35249 ATP5J2P6-201ENST00000565203 266 ntBASIC6.49□□□□□ -1.37
RFC4P35249 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
RFC4P35249 AP001521.2-201ENST00000608772 546 ntBASIC6.49□□□□□ -1.37
RFC4P35249 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.49□□□□□ -1.37
RFC4P35249 AC019193.2-201ENST00000610012 634 ntBASIC6.49□□□□□ -1.37
RFC4P35249 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFC4P35249 AC232271.1-201ENST00000602455 2715 ntBASIC6.49□□□□□ -1.37
RFC4P35249 MAPK10-263ENST00000641052 4307 ntBASIC6.49□□□□□ -1.37
RFC4P35249 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.49□□□□□ -1.37
RFC4P35249 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFC4P35249 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFC4P35249 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
RFC4P35249 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFC4P35249 AC004158.1-201ENST00000564508 4319 ntBASIC6.48□□□□□ -1.37
RFC4P35249 AL359955.1-201ENST00000455242 3275 ntBASIC6.48□□□□□ -1.37
RFC4P35249 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFC4P35249 Z98755.1-201ENST00000407015 1384 ntBASIC6.48□□□□□ -1.37
RFC4P35249 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFC4P35249 AC003973.3-201ENST00000624863 2822 ntBASIC6.48□□□□□ -1.37
RFC4P35249 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.48□□□□□ -1.37
RFC4P35249 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.48□□□□□ -1.37
RFC4P35249 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
RFC4P35249 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
RFC4P35249 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
RFC4P35249 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFC4P35249 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.48□□□□□ -1.37
RFC4P35249 RPL36AP15-201ENST00000444514 266 ntBASIC6.48□□□□□ -1.37
RFC4P35249 AL356390.1-201ENST00000455684 397 ntBASIC6.48□□□□□ -1.37
RFC4P35249 AC026979.1-201ENST00000492525 396 ntBASIC6.48□□□□□ -1.37
RFC4P35249 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.48□□□□□ -1.37
RFC4P35249 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms