Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL161616.1-201ENST00000611867 286 ntBASIC8.03□□□□□ -1.12
CLIP1P30622 MIR7703-201ENST00000620784 77 ntBASIC8.03□□□□□ -1.12
CLIP1P30622 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
CLIP1P30622 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
CLIP1P30622 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
CLIP1P30622 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC8.02□□□□□ -1.12
CLIP1P30622 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC8.02□□□□□ -1.13
CLIP1P30622 CASC19-260ENST00000641828 2001 ntBASIC8.02□□□□□ -1.13
CLIP1P30622 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC8.02□□□□□ -1.13
CLIP1P30622 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CLIP1P30622 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC8.02□□□□□ -1.13
CLIP1P30622 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CLIP1P30622 OFD1P9Y-201ENST00000417699 1491 ntBASIC8.02□□□□□ -1.13
CLIP1P30622 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
CLIP1P30622 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC8.02□□□□□ -1.13
CLIP1P30622 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CLIP1P30622 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CLIP1P30622 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CLIP1P30622 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CLIP1P30622 AL035079.1-201ENST00000405210 287 ntBASIC8.02□□□□□ -1.13
CLIP1P30622 AF186996.5-201ENST00000418098 904 ntBASIC8.02□□□□□ -1.13
CLIP1P30622 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC8.02□□□□□ -1.13
CLIP1P30622 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC8.02□□□□□ -1.13
CLIP1P30622 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC8.02□□□□□ -1.13
CLIP1P30622 AC096741.1-201ENST00000472250 846 ntBASIC8.02□□□□□ -1.13
CLIP1P30622 SSR3-206ENST00000476217 807 ntTSL 3 BASIC8.02□□□□□ -1.13
CLIP1P30622 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC8.02□□□□□ -1.13
CLIP1P30622 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC8.02□□□□□ -1.13
CLIP1P30622 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC8.02□□□□□ -1.13
CLIP1P30622 BGLT3-201ENST00000564523 994 ntBASIC8.02□□□□□ -1.13
CLIP1P30622 AP000346.3-201ENST00000622821 210 ntBASIC8.02□□□□□ -1.13
CLIP1P30622 MIR7641-1-201ENST00000627518 61 ntBASIC8.02□□□□□ -1.13
CLIP1P30622 SDAD1P1-202ENST00000524156 2051 ntBASIC8.02□□□□□ -1.13
CLIP1P30622 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CLIP1P30622 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CLIP1P30622 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CLIP1P30622 AL360270.2-201ENST00000562952 5985 ntBASIC8.01□□□□□ -1.13
CLIP1P30622 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC8.01□□□□□ -1.13
CLIP1P30622 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CLIP1P30622 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CLIP1P30622 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CLIP1P30622 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC8.01□□□□□ -1.13
CLIP1P30622 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC8.01□□□□□ -1.13
CLIP1P30622 SCARNA9-201ENST00000530422 353 ntBASIC8.01□□□□□ -1.13
CLIP1P30622 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC8.01□□□□□ -1.13
CLIP1P30622 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC8.01□□□□□ -1.13
CLIP1P30622 RPL27-207ENST00000590864 569 ntTSL 2 BASIC8.01□□□□□ -1.13
CLIP1P30622 AC011453.2-201ENST00000603737 729 ntBASIC8.01□□□□□ -1.13
CLIP1P30622 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC8.01□□□□□ -1.13
CLIP1P30622 ZNRD1ASP-221ENST00000637794 1074 ntBASIC8.01□□□□□ -1.13
CLIP1P30622 AC092451.3-201ENST00000625067 1343 ntBASIC8.01□□□□□ -1.13
CLIP1P30622 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
CLIP1P30622 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC8.01□□□□□ -1.13
CLIP1P30622 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CLIP1P30622 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CLIP1P30622 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
CLIP1P30622 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
CLIP1P30622 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CLIP1P30622 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CLIP1P30622 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CLIP1P30622 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC8□□□□□ -1.13
CLIP1P30622 ADAM24P-201ENST00000398655 2101 ntBASIC8□□□□□ -1.13
CLIP1P30622 HMGB3P7-201ENST00000400214 611 ntBASIC8□□□□□ -1.13
CLIP1P30622 GTF2IP5-201ENST00000414608 731 ntBASIC8□□□□□ -1.13
CLIP1P30622 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC8□□□□□ -1.13
CLIP1P30622 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC8□□□□□ -1.13
CLIP1P30622 AL691482.1-201ENST00000453255 87 ntBASIC8□□□□□ -1.13
CLIP1P30622 RN7SL205P-201ENST00000490174 284 ntBASIC8□□□□□ -1.13
CLIP1P30622 OR7H2P-201ENST00000513483 306 ntBASIC8□□□□□ -1.13
CLIP1P30622 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC8□□□□□ -1.13
CLIP1P30622 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC8□□□□□ -1.13
CLIP1P30622 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC8□□□□□ -1.13
CLIP1P30622 MIR3667-201ENST00000581025 74 ntBASIC8□□□□□ -1.13
CLIP1P30622 MIR4697-201ENST00000582977 78 ntBASIC8□□□□□ -1.13
CLIP1P30622 RN7SL52P-201ENST00000584271 284 ntBASIC8□□□□□ -1.13
CLIP1P30622 RN7SL722P-201ENST00000617780 284 ntBASIC8□□□□□ -1.13
CLIP1P30622 RN7SL565P-201ENST00000618246 284 ntBASIC8□□□□□ -1.13
CLIP1P30622 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC8□□□□□ -1.13
CLIP1P30622 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC8□□□□□ -1.13
CLIP1P30622 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
CLIP1P30622 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CLIP1P30622 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC8□□□□□ -1.13
CLIP1P30622 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC8□□□□□ -1.13
CLIP1P30622 AC026951.1-201ENST00000559530 2459 ntBASIC8□□□□□ -1.13
CLIP1P30622 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC8□□□□□ -1.13
CLIP1P30622 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC8□□□□□ -1.13
CLIP1P30622 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CLIP1P30622 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC8□□□□□ -1.13
CLIP1P30622 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
CLIP1P30622 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC7.99□□□□□ -1.13
CLIP1P30622 LRRC37BP1-201ENST00000398851 714 ntBASIC7.99□□□□□ -1.13
CLIP1P30622 AL136116.2-201ENST00000404020 785 ntBASIC7.99□□□□□ -1.13
CLIP1P30622 NPM1P40-201ENST00000412758 733 ntBASIC7.99□□□□□ -1.13
CLIP1P30622 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.99□□□□□ -1.13
CLIP1P30622 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC7.99□□□□□ -1.13
CLIP1P30622 PRPF38AP2-201ENST00000438179 851 ntBASIC7.99□□□□□ -1.13
CLIP1P30622 AC112498.1-201ENST00000444401 332 ntBASIC7.99□□□□□ -1.13
CLIP1P30622 AC073264.2-201ENST00000448886 166 ntBASIC7.99□□□□□ -1.13
CLIP1P30622 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC7.99□□□□□ -1.13
CLIP1P30622 HMGB1P4-201ENST00000455362 567 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms