Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TNFSF4P23510 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.4□□□□□ -1.54
TNFSF4P23510 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.4□□□□□ -1.54
TNFSF4P23510 DEFA9P-201ENST00000433042 285 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 AC084290.1-201ENST00000434995 374 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TNFSF4P23510 TXNP5-201ENST00000441043 315 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 TPTE2P3-201ENST00000441562 1189 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 CXCR2P1-202ENST00000443392 1074 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 REG1CP-206ENST00000447469 496 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.4□□□□□ -1.54
TNFSF4P23510 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.4□□□□□ -1.54
TNFSF4P23510 RN7SL552P-201ENST00000462094 276 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 PRDX3P4-201ENST00000470828 747 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 RN7SL836P-201ENST00000476140 296 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 AC117394.1-201ENST00000477323 567 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 AC015724.1-201ENST00000478577 156 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 GAPDHP39-201ENST00000481866 979 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 OR9A1P-202ENST00000484361 945 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.4□□□□□ -1.54
TNFSF4P23510 NPM1P27-201ENST00000502784 830 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.4□□□□□ -1.54
TNFSF4P23510 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.4□□□□□ -1.54
TNFSF4P23510 RN7SKP248-201ENST00000516278 305 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 RNA5SP400-201ENST00000517155 111 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.4□□□□□ -1.54
TNFSF4P23510 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.4□□□□□ -1.54
TNFSF4P23510 OR5AM1P-201ENST00000532136 1032 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.4□□□□□ -1.54
TNFSF4P23510 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.4□□□□□ -1.54
TNFSF4P23510 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.4□□□□□ -1.54
TNFSF4P23510 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.4□□□□□ -1.54
TNFSF4P23510 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.4□□□□□ -1.54
TNFSF4P23510 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.4□□□□□ -1.54
TNFSF4P23510 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.4□□□□□ -1.54
TNFSF4P23510 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.4□□□□□ -1.54
TNFSF4P23510 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.4□□□□□ -1.54
TNFSF4P23510 AL020997.3-201ENST00000602843 359 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 AC021749.1-201ENST00000604322 607 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 AC073046.2-201ENST00000604756 527 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 AL445423.1-201ENST00000609941 536 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 Z95327.3-201ENST00000610385 572 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 TCL6_3.1-201ENST00000619064 137 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 AP001052.1-201ENST00000626421 99 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TNFSF4P23510 LINC02211-204ENST00000642024 1070 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 OR7E91P-202ENST00000642062 1198 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 AC008691.1-209ENST00000642094 814 ntBASIC5.4□□□□□ -1.54
TNFSF4P23510 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.4□□□□□ -1.55
TNFSF4P23510 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TNFSF4P23510 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.4□□□□□ -1.55
TNFSF4P23510 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TNFSF4P23510 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TNFSF4P23510 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TNFSF4P23510 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TNFSF4P23510 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.4□□□□□ -1.55
TNFSF4P23510 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
TNFSF4P23510 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
TNFSF4P23510 AC005261.4-201ENST00000600047 1385 ntBASIC5.4□□□□□ -1.55
TNFSF4P23510 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
TNFSF4P23510 USP9YP4-201ENST00000424401 1745 ntBASIC5.4□□□□□ -1.55
TNFSF4P23510 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TNFSF4P23510 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.39□□□□□ -1.55
TNFSF4P23510 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TNFSF4P23510 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.39□□□□□ -1.55
TNFSF4P23510 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.39□□□□□ -1.55
TNFSF4P23510 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.39□□□□□ -1.55
TNFSF4P23510 CR788268.1-201ENST00000603931 1809 ntBASIC5.39□□□□□ -1.55
TNFSF4P23510 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TNFSF4P23510 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.39□□□□□ -1.55
TNFSF4P23510 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TNFSF4P23510 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.39□□□□□ -1.55
TNFSF4P23510 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TNFSF4P23510 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TNFSF4P23510 AL136984.1-201ENST00000607611 1893 ntBASIC5.39□□□□□ -1.55
TNFSF4P23510 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.39□□□□□ -1.55
TNFSF4P23510 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
TNFSF4P23510 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TNFSF4P23510 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.39□□□□□ -1.55
TNFSF4P23510 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TNFSF4P23510 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
TNFSF4P23510 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TNFSF4P23510 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TNFSF4P23510 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TNFSF4P23510 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TNFSF4P23510 STAG3L4-201ENST00000352103 530 ntBASIC5.39□□□□□ -1.55
TNFSF4P23510 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TNFSF4P23510 TMSB4XP8-201ENST00000402089 135 ntBASIC5.39□□□□□ -1.55
TNFSF4P23510 AL139805.1-201ENST00000407837 289 ntBASIC5.39□□□□□ -1.55
TNFSF4P23510 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TNFSF4P23510 RNU6-603P-201ENST00000411403 107 ntBASIC5.39□□□□□ -1.55
TNFSF4P23510 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.39□□□□□ -1.55
TNFSF4P23510 TMSB4XP6-201ENST00000415187 135 ntBASIC5.39□□□□□ -1.55
TNFSF4P23510 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.39□□□□□ -1.55
TNFSF4P23510 TMSB4XP1-201ENST00000424567 135 ntBASIC5.39□□□□□ -1.55
TNFSF4P23510 AC099782.1-201ENST00000425889 474 ntBASIC5.39□□□□□ -1.55
TNFSF4P23510 AC245884.2-201ENST00000426257 404 ntBASIC5.39□□□□□ -1.55
TNFSF4P23510 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.39□□□□□ -1.55
TNFSF4P23510 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms