Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DPA1P20036 NPM1P37-201ENST00000403105 874 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 GPS2P1-201ENST00000411761 986 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AC079355.1-201ENST00000421770 223 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AL354766.1-201ENST00000423396 542 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AC017019.1-201ENST00000426129 261 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AC016772.1-201ENST00000444170 1261 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.45□□□□□ -1.54
HLA-DPA1P20036 RANP1-206ENST00000455094 651 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AC100832.1-201ENST00000471945 383 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 MTND3P6-201ENST00000485242 339 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 RPS24P16-201ENST00000497294 392 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.45□□□□□ -1.54
HLA-DPA1P20036 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.45□□□□□ -1.54
HLA-DPA1P20036 RPL7L1P4-201ENST00000513004 707 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.45□□□□□ -1.54
HLA-DPA1P20036 OR8G3P-201ENST00000533406 921 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AC009268.1-201ENST00000561352 1203 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DPA1P20036 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AC010487.1-201ENST00000594408 1172 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AC108738.1-201ENST00000603703 237 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AC000068.2-201ENST00000608816 460 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AC244107.2-201ENST00000611773 76 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 MIR8080-201ENST00000622224 89 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AC083843.2-201ENST00000568248 6253 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HLA-DPA1P20036 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
HLA-DPA1P20036 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AC019072.1-201ENST00000604535 1551 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 AL592429.1-201ENST00000403909 1473 ntBASIC5.45□□□□□ -1.54
HLA-DPA1P20036 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 SNORA51.1-201ENST00000363243 140 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 SNORA16A-201ENST00000384342 137 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AL607077.1-201ENST00000401718 499 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 ST13P16-201ENST00000401760 781 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 OR3A2-201ENST00000408891 1076 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 GABARAPL3-201ENST00000412799 354 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AC097523.2-201ENST00000435551 652 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AC012075.1-201ENST00000436549 580 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 GAPDHP25-201ENST00000447061 1001 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AL035090.1-201ENST00000454835 332 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 SNRPCP3-201ENST00000474888 476 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 HAUS1P1-201ENST00000505275 832 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 HMGN1P9-201ENST00000515212 298 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 snoU109.6-201ENST00000516831 118 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 CDC42P3-201ENST00000518493 633 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AC084759.1-201ENST00000561168 290 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AF117829.2-201ENST00000619538 361 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AC092159.4-201ENST00000624944 550 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AC132825.1-201ENST00000463573 2247 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AC079298.1-201ENST00000625026 1619 ntBASIC5.44□□□□□ -1.54
HLA-DPA1P20036 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.44□□□□□ -1.54
HLA-DPA1P20036 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 MIR133B-201ENST00000362210 119 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 RNU6-819P-201ENST00000364116 107 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms