Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGA1P17096 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGA1P17096 RNA5SP191-201ENST00000362585 102 ntBASIC5.22□□□□□ -1.57
HMGA1P17096 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HMGA1P17096 AL035079.1-201ENST00000405210 287 ntBASIC5.22□□□□□ -1.57
HMGA1P17096 RNA5SP113-201ENST00000410486 84 ntBASIC5.22□□□□□ -1.57
HMGA1P17096 GTF2IP5-201ENST00000414608 731 ntBASIC5.22□□□□□ -1.57
HMGA1P17096 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGA1P17096 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.22□□□□□ -1.57
HMGA1P17096 RPS27AP6-201ENST00000427962 448 ntBASIC5.22□□□□□ -1.57
HMGA1P17096 AL450023.3-201ENST00000440592 271 ntBASIC5.22□□□□□ -1.57
HMGA1P17096 RPL7AP61-201ENST00000443410 636 ntBASIC5.22□□□□□ -1.57
HMGA1P17096 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGA1P17096 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGA1P17096 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGA1P17096 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGA1P17096 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGA1P17096 AC016559.2-201ENST00000510759 359 ntBASIC5.22□□□□□ -1.57
HMGA1P17096 AC097486.1-201ENST00000515331 210 ntBASIC5.22□□□□□ -1.57
HMGA1P17096 AC063949.1-201ENST00000552900 865 ntBASIC5.22□□□□□ -1.57
HMGA1P17096 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGA1P17096 MTCYBP13-201ENST00000578634 1093 ntBASIC5.22□□□□□ -1.57
HMGA1P17096 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGA1P17096 AC020910.3-201ENST00000603701 874 ntBASIC5.22□□□□□ -1.57
HMGA1P17096 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGA1P17096 MIR7703-201ENST00000620784 77 ntBASIC5.22□□□□□ -1.57
HMGA1P17096 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGA1P17096 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGA1P17096 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGA1P17096 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
HMGA1P17096 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGA1P17096 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HMGA1P17096 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGA1P17096 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGA1P17096 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGA1P17096 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGA1P17096 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
HMGA1P17096 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGA1P17096 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGA1P17096 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGA1P17096 AL669831.5-218ENST00000591702 1873 ntBASIC5.22□□□□□ -1.57
HMGA1P17096 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGA1P17096 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HMGA1P17096 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.21□□□□□ -1.57
HMGA1P17096 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HMGA1P17096 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
HMGA1P17096 SMG1P7-201ENST00000565246 2704 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGA1P17096 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGA1P17096 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGA1P17096 MFSD8-216ENST00000641147 4009 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGA1P17096 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
HMGA1P17096 SDAD1P1-202ENST00000524156 2051 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGA1P17096 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HMGA1P17096 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGA1P17096 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
HMGA1P17096 SNORA70.10-201ENST00000384515 134 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGA1P17096 RPL10P10-201ENST00000403509 664 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 U3.32-201ENST00000408116 212 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 RPL12P9-201ENST00000412942 488 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 AL590139.1-201ENST00000416267 400 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 AC004074.1-201ENST00000421810 1063 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGA1P17096 TXNP5-201ENST00000441043 315 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 RPL5P25-201ENST00000441148 775 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 RPL36AP15-201ENST00000444514 266 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 AC009963.4-201ENST00000448535 339 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 RBMY2TP-201ENST00000451162 947 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 RPL23AP56-201ENST00000460778 453 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 AC091180.1-201ENST00000462104 372 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGA1P17096 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGA1P17096 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGA1P17096 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGA1P17096 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGA1P17096 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGA1P17096 BNIP3P1-201ENST00000547295 580 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 CR383656.6-201ENST00000550518 394 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGA1P17096 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGA1P17096 MIR3667-201ENST00000581025 74 ntBASIC5.21□□□□□ -1.58
HMGA1P17096 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.21□□□□□ -1.58
HMGA1P17096 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGA1P17096 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGA1P17096 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGA1P17096 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGA1P17096 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGA1P17096 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGA1P17096 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGA1P17096 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HMGA1P17096 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGA1P17096 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGA1P17096 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGA1P17096 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGA1P17096 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGA1P17096 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGA1P17096 SAMMSON-226ENST00000642089 1582 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms