Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC092106.2-201ENST00000436597 487 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL6A2P12110 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.23□□□□□ -1.41
COL6A2P12110 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.23□□□□□ -1.41
COL6A2P12110 MTND6P5-201ENST00000448266 512 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 CALM1P2-201ENST00000452941 448 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 AL109741.2-201ENST00000455561 343 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 AL445687.2-201ENST00000458156 728 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 RN7SL70P-201ENST00000478322 302 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.23□□□□□ -1.41
COL6A2P12110 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.23□□□□□ -1.41
COL6A2P12110 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
COL6A2P12110 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.23□□□□□ -1.41
COL6A2P12110 IGHV4-55-201ENST00000520889 368 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC6.23□□□□□ -1.41
COL6A2P12110 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.23□□□□□ -1.41
COL6A2P12110 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL6A2P12110 AC007115.1-201ENST00000546853 234 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.23□□□□□ -1.41
COL6A2P12110 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.23□□□□□ -1.41
COL6A2P12110 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.23□□□□□ -1.41
COL6A2P12110 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC6.23□□□□□ -1.41
COL6A2P12110 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.23□□□□□ -1.41
COL6A2P12110 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.23□□□□□ -1.41
COL6A2P12110 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.23□□□□□ -1.41
COL6A2P12110 GLYATL1P2-202ENST00000588046 902 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.23□□□□□ -1.41
COL6A2P12110 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC6.23□□□□□ -1.41
COL6A2P12110 AP001981.2-201ENST00000603241 418 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 AL031281.1-201ENST00000604049 488 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 AC073046.2-201ENST00000604756 527 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL6A2P12110 AC011815.3-201ENST00000624194 473 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
COL6A2P12110 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6.23□□□□□ -1.41
COL6A2P12110 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.23□□□□□ -1.41
COL6A2P12110 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL6A2P12110 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL6A2P12110 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.23□□□□□ -1.41
COL6A2P12110 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
COL6A2P12110 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.23□□□□□ -1.41
COL6A2P12110 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL6A2P12110 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.23□□□□□ -1.41
COL6A2P12110 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL6A2P12110 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL6A2P12110 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.23□□□□□ -1.41
COL6A2P12110 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.23□□□□□ -1.41
COL6A2P12110 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL6A2P12110 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
COL6A2P12110 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL6A2P12110 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL6A2P12110 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL6A2P12110 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL6A2P12110 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
COL6A2P12110 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL6A2P12110 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL6A2P12110 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
COL6A2P12110 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.22□□□□□ -1.41
COL6A2P12110 AL353133.1-201ENST00000407695 401 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 AC015977.1-201ENST00000418887 292 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 AC098592.1-201ENST00000419352 333 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.22□□□□□ -1.41
COL6A2P12110 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.22□□□□□ -1.41
COL6A2P12110 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC6.22□□□□□ -1.41
COL6A2P12110 TAF9P1-201ENST00000445421 515 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 AL606662.1-201ENST00000445763 553 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL6A2P12110 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC6.22□□□□□ -1.41
COL6A2P12110 RPL12P26-201ENST00000452430 487 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 TAF9P2-201ENST00000454958 515 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 RN7SL643P-201ENST00000471845 291 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 AC079080.1-201ENST00000479841 822 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 AL079303.1-201ENST00000486611 463 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.22□□□□□ -1.41
COL6A2P12110 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL6A2P12110 AC107401.1-201ENST00000503426 685 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 AF213884.2-201ENST00000510417 903 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 AC010625.1-201ENST00000511296 403 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.22□□□□□ -1.41
COL6A2P12110 MINOS1P4-201ENST00000515470 318 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 RPL12P22-201ENST00000519073 490 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.22□□□□□ -1.41
COL6A2P12110 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL6A2P12110 AL133399.1-201ENST00000527476 298 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 BCAS2P1-201ENST00000528022 632 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.22□□□□□ -1.41
COL6A2P12110 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.22□□□□□ -1.41
COL6A2P12110 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.22□□□□□ -1.41
COL6A2P12110 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.22□□□□□ -1.41
COL6A2P12110 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.22□□□□□ -1.41
COL6A2P12110 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC6.22□□□□□ -1.41
COL6A2P12110 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.22□□□□□ -1.41
COL6A2P12110 ACTR3BP3-201ENST00000565577 979 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.22□□□□□ -1.41
COL6A2P12110 AC022001.1-201ENST00000605193 268 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 SNORA74.4-201ENST00000607595 199 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 AC104073.3-201ENST00000610942 955 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 324.4 ms