Protein–RNA interactions for Protein: P12109

COL6A1, Collagen alpha-1(VI) chain, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1P12109 AL390119.1-201ENST00000440329 312 ntBASIC6.65□□□□□ -1.34
COL6A1P12109 MTCYBP12-201ENST00000440559 1134 ntBASIC6.65□□□□□ -1.34
COL6A1P12109 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.65□□□□□ -1.34
COL6A1P12109 AC069540.1-201ENST00000446320 988 ntBASIC6.65□□□□□ -1.34
COL6A1P12109 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.65□□□□□ -1.34
COL6A1P12109 ZNF886P-201ENST00000450781 723 ntBASIC6.65□□□□□ -1.34
COL6A1P12109 AC020779.1-201ENST00000478757 796 ntBASIC6.65□□□□□ -1.34
COL6A1P12109 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.65□□□□□ -1.34
COL6A1P12109 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.65□□□□□ -1.34
COL6A1P12109 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
COL6A1P12109 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.65□□□□□ -1.34
COL6A1P12109 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
COL6A1P12109 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.65□□□□□ -1.34
COL6A1P12109 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC6.65□□□□□ -1.34
COL6A1P12109 NDUFAF4P1-201ENST00000559425 519 ntBASIC6.65□□□□□ -1.34
COL6A1P12109 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.65□□□□□ -1.34
COL6A1P12109 VN1R78P-201ENST00000597393 564 ntBASIC6.65□□□□□ -1.34
COL6A1P12109 AL158042.1-201ENST00000605338 460 ntBASIC6.65□□□□□ -1.34
COL6A1P12109 AC093673.2-201ENST00000609674 331 ntBASIC6.65□□□□□ -1.34
COL6A1P12109 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.65□□□□□ -1.34
COL6A1P12109 AC013562.2-201ENST00000611632 603 ntBASIC6.65□□□□□ -1.34
COL6A1P12109 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.65□□□□□ -1.34
COL6A1P12109 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.65□□□□□ -1.34
COL6A1P12109 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL6A1P12109 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.65□□□□□ -1.35
COL6A1P12109 MTND4P4-201ENST00000439033 1366 ntBASIC6.65□□□□□ -1.35
COL6A1P12109 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.35
COL6A1P12109 LINC02019-201ENST00000608605 2060 ntBASIC6.65□□□□□ -1.35
COL6A1P12109 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL6A1P12109 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL6A1P12109 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.65□□□□□ -1.35
COL6A1P12109 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL6A1P12109 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
COL6A1P12109 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.65□□□□□ -1.35
COL6A1P12109 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A1P12109 AC010329.1-201ENST00000593903 8328 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A1P12109 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A1P12109 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A1P12109 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A1P12109 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COL6A1P12109 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.64□□□□□ -1.35
COL6A1P12109 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A1P12109 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COL6A1P12109 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.64□□□□□ -1.35
COL6A1P12109 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.64□□□□□ -1.35
COL6A1P12109 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A1P12109 AC008957.3-201ENST00000624112 2242 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A1P12109 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A1P12109 RAD1P1-201ENST00000231383 813 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 AC017079.1-201ENST00000333650 415 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.64□□□□□ -1.35
COL6A1P12109 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A1P12109 RN7SKP186-201ENST00000365371 303 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A1P12109 MIR433-201ENST00000384837 93 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 AC104297.1-201ENST00000393779 870 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 MRPL53P1-201ENST00000414323 319 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 RPL23AP27-201ENST00000415161 451 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 RPA2P2-201ENST00000419698 796 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 MFSD13B-201ENST00000420133 1290 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.64□□□□□ -1.35
COL6A1P12109 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.64□□□□□ -1.35
COL6A1P12109 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COL6A1P12109 FMO7P-201ENST00000436045 768 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.64□□□□□ -1.35
COL6A1P12109 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.64□□□□□ -1.35
COL6A1P12109 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC6.64□□□□□ -1.35
COL6A1P12109 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.64□□□□□ -1.35
COL6A1P12109 AC091685.2-201ENST00000454924 864 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 RPL35AP19-201ENST00000469425 329 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 AC004453.1-201ENST00000487895 408 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COL6A1P12109 AC015864.1-201ENST00000496512 544 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 AC024558.1-201ENST00000505008 528 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.64□□□□□ -1.35
COL6A1P12109 RNU6-615P-201ENST00000516065 106 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC6.64□□□□□ -1.35
COL6A1P12109 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
COL6A1P12109 HAUS8P1-201ENST00000549005 542 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 ZNF321P-202ENST00000550843 495 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.64□□□□□ -1.35
COL6A1P12109 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.64□□□□□ -1.35
COL6A1P12109 AC010735.1-201ENST00000567305 1026 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 AC109446.2-201ENST00000567872 497 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.64□□□□□ -1.35
COL6A1P12109 FAM106CP-201ENST00000582212 507 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 AL139344.1-201ENST00000605228 195 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 OR51C1P-201ENST00000608504 942 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 AC006840.1-201ENST00000623069 542 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 AL596275.2-208ENST00000641192 594 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 BX649567.1-201ENST00000642071 1134 ntBASIC6.64□□□□□ -1.35
COL6A1P12109 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A1P12109 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.64□□□□□ -1.35
COL6A1P12109 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
COL6A1P12109 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A1P12109 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.64□□□□□ -1.35
COL6A1P12109 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A1P12109 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms