Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC133963.2-201ENST00000513686 578 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 RN7SKP141-201ENST00000516167 338 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-2O95096 NRBF2P4-201ENST00000520874 850 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.15□□□□□ -1.59
NKX2-2O95096 TRIM51DP-201ENST00000529746 596 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.15□□□□□ -1.59
NKX2-2O95096 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.15□□□□□ -1.59
NKX2-2O95096 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.15□□□□□ -1.59
NKX2-2O95096 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX2-2O95096 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.15□□□□□ -1.59
NKX2-2O95096 AC010547.6-201ENST00000571789 193 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 AC124283.4-201ENST00000581815 456 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 EIF1P5-201ENST00000585002 234 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 AC004477.3-201ENST00000614061 590 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 MIR6133-201ENST00000617057 108 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX2-2O95096 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX2-2O95096 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-2O95096 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX2-2O95096 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.15□□□□□ -1.59
NKX2-2O95096 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
NKX2-2O95096 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-2O95096 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-2O95096 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
NKX2-2O95096 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.15□□□□□ -1.59
NKX2-2O95096 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-2O95096 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.15□□□□□ -1.59
NKX2-2O95096 AC079097.1-201ENST00000512187 1399 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX2-2O95096 AC068870.3-201ENST00000625077 2536 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.15□□□□□ -1.59
NKX2-2O95096 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-2O95096 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NKX2-2O95096 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-2O95096 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX2-2O95096 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-2O95096 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 HSPA8P19-201ENST00000505359 1517 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 AC015799.1-201ENST00000622996 3122 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-2O95096 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 RNA5SP514-201ENST00000363717 111 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 MIR551A-201ENST00000385042 96 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NKX2-2O95096 U3.28-201ENST00000391249 210 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-2O95096 AC010385.1-201ENST00000412374 256 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 OR2AT2P-201ENST00000413438 905 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 RPSAP35-201ENST00000413753 818 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 AL596448.1-201ENST00000415024 392 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 BX664727.1-201ENST00000416024 466 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX2-2O95096 AL354692.1-201ENST00000423044 315 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 AL133173.1-201ENST00000423458 397 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 PNRC2P1-201ENST00000423940 420 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NKX2-2O95096 MTND6P12-201ENST00000428247 522 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 KCTD9P1-201ENST00000430462 1167 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 NDUFB4P8-201ENST00000435351 367 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 CACYBPP1-201ENST00000438592 684 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX2-2O95096 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX2-2O95096 AC073109.1-201ENST00000445066 978 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 VDAC2P4-201ENST00000452925 711 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 AL358876.1-201ENST00000453364 1075 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX2-2O95096 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.14□□□□□ -1.59
NKX2-2O95096 AC008379.1-201ENST00000463655 464 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX2-2O95096 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.14□□□□□ -1.59
NKX2-2O95096 RPEP1-201ENST00000504507 658 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.14□□□□□ -1.59
NKX2-2O95096 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 AC021106.1-201ENST00000509020 1058 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 SNORA31.13-201ENST00000516624 135 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 AP003355.1-201ENST00000518956 587 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.14□□□□□ -1.59
NKX2-2O95096 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX2-2O95096 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX2-2O95096 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX2-2O95096 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-2O95096 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX2-2O95096 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 MRPS21P7-201ENST00000566937 238 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-2O95096 AC106734.1-201ENST00000568646 663 ntBASIC5.14□□□□□ -1.59
NKX2-2O95096 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX2-2O95096 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-2O95096 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms