Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
RNF40O75150 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF40O75150 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF40O75150 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF40O75150 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF40O75150 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF40O75150 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 SPATA31C1-201ENST00000420021 3895 ntBASIC8.18□□□□□ -1.1
RNF40O75150 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC8.18□□□□□ -1.1
RNF40O75150 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 AL589993.1-201ENST00000407450 2524 ntBASIC8.18□□□□□ -1.1
RNF40O75150 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 RNU6-1026P-201ENST00000384465 108 ntBASIC8.18□□□□□ -1.1
RNF40O75150 MIR16-1-201ENST00000385271 89 ntBASIC8.18□□□□□ -1.1
RNF40O75150 MIR106B-201ENST00000385301 82 ntBASIC8.18□□□□□ -1.1
RNF40O75150 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
RNF40O75150 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC8.18□□□□□ -1.1
RNF40O75150 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC8.18□□□□□ -1.1
RNF40O75150 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC8.18□□□□□ -1.1
RNF40O75150 AC009302.1-201ENST00000417147 390 ntBASIC8.18□□□□□ -1.1
RNF40O75150 RPL34P27-201ENST00000428810 349 ntBASIC8.18□□□□□ -1.1
RNF40O75150 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC8.18□□□□□ -1.1
RNF40O75150 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC8.18□□□□□ -1.1
RNF40O75150 CR391992.1-201ENST00000438601 394 ntBASIC8.18□□□□□ -1.1
RNF40O75150 CYP2C56P-201ENST00000440076 291 ntBASIC8.18□□□□□ -1.1
RNF40O75150 HIST1H2APS6-201ENST00000448609 364 ntBASIC8.18□□□□□ -1.1
RNF40O75150 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC8.18□□□□□ -1.1
RNF40O75150 RPS27AP17-201ENST00000463344 455 ntBASIC8.18□□□□□ -1.1
RNF40O75150 AC090589.1-201ENST00000473109 362 ntBASIC8.18□□□□□ -1.1
RNF40O75150 RAD51AP1P1-201ENST00000484195 1001 ntBASIC8.18□□□□□ -1.1
RNF40O75150 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC8.18□□□□□ -1.1
RNF40O75150 AC108120.2-201ENST00000512973 294 ntBASIC8.18□□□□□ -1.1
RNF40O75150 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 AP003122.3-201ENST00000526316 255 ntBASIC8.18□□□□□ -1.1
RNF40O75150 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC8.18□□□□□ -1.1
RNF40O75150 REG4-204ENST00000530654 612 ntTSL 5 BASIC8.18□□□□□ -1.1
RNF40O75150 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC8.18□□□□□ -1.1
RNF40O75150 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC8.18□□□□□ -1.1
RNF40O75150 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
RNF40O75150 ARL6IP1P1-201ENST00000545836 610 ntBASIC8.18□□□□□ -1.1
RNF40O75150 NUTF2P2-201ENST00000551207 384 ntBASIC8.18□□□□□ -1.1
RNF40O75150 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC8.18□□□□□ -1.1
RNF40O75150 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.18□□□□□ -1.1
RNF40O75150 AC103710.4-201ENST00000609301 899 ntBASIC8.18□□□□□ -1.1
RNF40O75150 AC104237.2-201ENST00000612456 443 ntBASIC8.18□□□□□ -1.1
RNF40O75150 AL132796.3-201ENST00000624703 900 ntBASIC8.18□□□□□ -1.1
RNF40O75150 AL049541.2-201ENST00000626377 555 ntBASIC8.18□□□□□ -1.1
RNF40O75150 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC8.18□□□□□ -1.1
RNF40O75150 ATM-228ENST00000639240 498 ntTSL 5 BASIC8.18□□□□□ -1.1
RNF40O75150 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 EEF1A1P3-201ENST00000417549 1385 ntBASIC8.18□□□□□ -1.1
RNF40O75150 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC8.18□□□□□ -1.1
RNF40O75150 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC8.18□□□□□ -1.1
RNF40O75150 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC8.18□□□□□ -1.1
RNF40O75150 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RNF40O75150 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC8.18□□□□□ -1.1
RNF40O75150 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC8.18□□□□□ -1.1
RNF40O75150 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RNF40O75150 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RNF40O75150 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC8.17□□□□□ -1.1
RNF40O75150 TRIM51HP-202ENST00000530412 1823 ntBASIC8.17□□□□□ -1.1
RNF40O75150 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RNF40O75150 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
RNF40O75150 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RNF40O75150 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
RNF40O75150 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RNF40O75150 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.17□□□□□ -1.1
RNF40O75150 OR4A15-201ENST00000314706 1035 ntBASIC8.17□□□□□ -1.1
RNF40O75150 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
RNF40O75150 AC067945.1-201ENST00000342609 618 ntBASIC8.17□□□□□ -1.1
RNF40O75150 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
RNF40O75150 Y_RNA.188-201ENST00000363952 111 ntBASIC8.17□□□□□ -1.1
RNF40O75150 RNU6-282P-201ENST00000365357 103 ntBASIC8.17□□□□□ -1.1
RNF40O75150 RPL23AP47-201ENST00000408017 460 ntBASIC8.17□□□□□ -1.1
RNF40O75150 TEX41-204ENST00000423031 491 ntTSL 4 BASIC8.17□□□□□ -1.1
RNF40O75150 AP001324.1-201ENST00000428553 399 ntBASIC8.17□□□□□ -1.1
RNF40O75150 ATP5LP4-201ENST00000434169 307 ntBASIC8.17□□□□□ -1.1
RNF40O75150 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
RNF40O75150 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC8.17□□□□□ -1.1
RNF40O75150 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC8.17□□□□□ -1.1
RNF40O75150 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC8.17□□□□□ -1.1
RNF40O75150 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC8.17□□□□□ -1.1
RNF40O75150 AC007000.1-201ENST00000453064 794 ntBASIC8.17□□□□□ -1.1
RNF40O75150 AC079944.1-201ENST00000485426 495 ntBASIC8.17□□□□□ -1.1
RNF40O75150 SNRPD2P1-201ENST00000489253 354 ntBASIC8.17□□□□□ -1.1
RNF40O75150 AC122714.1-201ENST00000502510 459 ntBASIC8.17□□□□□ -1.1
RNF40O75150 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms