Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXA3O43365 PSMA6P1-201ENST00000400275 741 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 PRELID1P1-201ENST00000403549 660 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 NACAP7-201ENST00000407371 609 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXA3O43365 TPMTP3-201ENST00000411928 735 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 FCF1P9-201ENST00000412546 282 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXA3O43365 AL663061.1-201ENST00000416625 580 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 Z99497.1-201ENST00000421282 135 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 IPPKP1-201ENST00000422501 768 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXA3O43365 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXA3O43365 AL357520.1-201ENST00000441557 453 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AC011742.2-201ENST00000443818 352 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 RPL5P10-201ENST00000445207 894 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 IGBP1P3-201ENST00000447449 1000 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXA3O43365 KATNBL1P6-201ENST00000453433 915 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 RPL5P32-201ENST00000454085 879 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HOXA3O43365 PGBD4P1-201ENST00000473644 407 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 RN7SL382P-201ENST00000482631 282 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AC011825.1-201ENST00000484967 388 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AC106822.1-201ENST00000502647 526 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 DYNLL1P6-201ENST00000503440 264 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AC111193.1-201ENST00000504097 155 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA3O43365 AC113367.2-201ENST00000505749 160 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXA3O43365 AC093870.1-201ENST00000506837 213 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXA3O43365 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXA3O43365 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXA3O43365 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXA3O43365 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AC087808.1-201ENST00000520501 361 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 IGJP1-201ENST00000522682 475 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA3O43365 AP002812.4-201ENST00000532139 286 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 OR4A6P-201ENST00000534364 970 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXA3O43365 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXA3O43365 AC090888.3-201ENST00000558917 509 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXA3O43365 ULK4P1-202ENST00000565174 503 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AC018558.5-201ENST00000565840 952 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AL512347.1-201ENST00000566420 503 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AL121834.1-201ENST00000572284 509 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 OR4K7P-201ENST00000580232 945 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 MIR548Y-201ENST00000582739 110 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
HOXA3O43365 EIF1P6-201ENST00000600054 334 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AL031775.1-201ENST00000607014 887 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AL589743.6-201ENST00000611025 117 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AC069209.1-201ENST00000619282 651 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 AC073592.6-201ENST00000624271 415 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 SNX18P10-201ENST00000625014 519 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 PFKM-232ENST00000629846 381 ntTSL 4 BASIC5.38□□□□□ -1.55
HOXA3O43365 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXA3O43365 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXA3O43365 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.38□□□□□ -1.55
HOXA3O43365 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA3O43365 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA3O43365 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXA3O43365 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA3O43365 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA3O43365 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXA3O43365 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXA3O43365 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXA3O43365 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA3O43365 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXA3O43365 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HOXA3O43365 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXA3O43365 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HOXA3O43365 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HOXA3O43365 AL603750.1-201ENST00000624216 1717 ntBASIC5.37□□□□□ -1.55
HOXA3O43365 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXA3O43365 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXA3O43365 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA3O43365 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA3O43365 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA3O43365 CUBNP3-201ENST00000457461 1784 ntBASIC5.37□□□□□ -1.55
HOXA3O43365 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA3O43365 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA3O43365 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXA3O43365 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA3O43365 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA3O43365 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXA3O43365 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA3O43365 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA3O43365 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA3O43365 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXA3O43365 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA3O43365 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA3O43365 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA3O43365 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms