Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC116553.2-201ENST00000564203 463 ntBASIC5.08□□□□□ -1.6
TRIM49D1C9J1S8 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM49D1C9J1S8 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM49D1C9J1S8 BNIP3P41-202ENST00000616656 861 ntBASIC5.08□□□□□ -1.6
TRIM49D1C9J1S8 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM49D1C9J1S8 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM49D1C9J1S8 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM49D1C9J1S8 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.08□□□□□ -1.6
TRIM49D1C9J1S8 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
TRIM49D1C9J1S8 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM49D1C9J1S8 PCAT14-202ENST00000627127 3935 ntBASIC5.08□□□□□ -1.6
TRIM49D1C9J1S8 AP001642.1-201ENST00000624727 2117 ntBASIC5.08□□□□□ -1.6
TRIM49D1C9J1S8 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM49D1C9J1S8 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM49D1C9J1S8 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 AC235565.1-201ENST00000456962 1325 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 RNA5SP510-201ENST00000364697 99 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 AC005522.1-201ENST00000395416 346 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 SDHDP6-201ENST00000414693 480 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 AL133325.1-201ENST00000421090 382 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 RPS4XP16-201ENST00000427198 791 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 FAM96AP1-201ENST00000430879 482 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 CYCSP6-201ENST00000434498 302 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 TXNP5-201ENST00000441043 315 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 HMGN1P36-201ENST00000446623 298 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 GYG1P1-201ENST00000460864 698 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 RN7SL443P-201ENST00000464331 290 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 AL512310.9-201ENST00000553311 948 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 SUGT1P3-202ENST00000604259 383 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 RPSAP73-201ENST00000614820 330 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 AC241377.1-201ENST00000619797 406 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 AC104260.2-201ENST00000623551 3497 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 AC068446.1-201ENST00000556425 1549 ntBASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM49D1C9J1S8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 NACAP7-201ENST00000407371 609 ntBASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 MIR1182-201ENST00000408363 97 ntBASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 MIR1271-201ENST00000408537 86 ntBASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 GNG5P5-201ENST00000420444 220 ntBASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 AC073109.1-201ENST00000445066 978 ntBASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 AL591473.1-201ENST00000464297 313 ntBASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 UGT2A3P7-201ENST00000510485 734 ntBASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 ENPP7P9-201ENST00000514456 627 ntBASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 AC126177.5-201ENST00000549599 178 ntBASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 AL049830.4-201ENST00000555149 351 ntBASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms