Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 OR1L6-202ENST00000373684 1044 ntBASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 OR6C64P-201ENST00000419708 825 ntBASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 TNPO1P1-201ENST00000423641 1138 ntBASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 MTND4LP13-201ENST00000425022 298 ntBASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 MTND6P12-201ENST00000428247 522 ntBASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AP000936.3-201ENST00000438127 255 ntBASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 OR52E7P-201ENST00000452394 933 ntBASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AP001960.1-201ENST00000506494 658 ntBASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AC109464.1-201ENST00000511091 819 ntBASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 MTND6P2-201ENST00000512226 524 ntBASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 snoU109.6-201ENST00000516831 118 ntBASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 RN7SKP99-201ENST00000517028 307 ntBASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 NRBF2P4-201ENST00000520874 850 ntBASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 PRPF19P1-201ENST00000584766 898 ntBASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AC091932.2-201ENST00000623014 291 ntBASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AC132068.1-201ENST00000623805 459 ntBASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
RHBDD3Q9Y3P4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 RN7SKP224-201ENST00000364140 325 ntBASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 AC007618.1-201ENST00000366455 732 ntBASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 SNORA16A-201ENST00000384342 137 ntBASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 MIR1282-201ENST00000408865 101 ntBASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 AC009302.1-201ENST00000417147 390 ntBASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 AKR1B10P1-201ENST00000425765 942 ntBASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 HSPE1P16-201ENST00000426640 348 ntBASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 RPS12P31-201ENST00000491419 398 ntBASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 EIF4EP5-201ENST00000528228 640 ntBASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 AC068993.1-201ENST00000546724 589 ntBASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 DPRXP4-201ENST00000578053 568 ntBASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 MIR6839-201ENST00000620425 113 ntBASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms