Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AP005403.1-201ENST00000579720 229 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC004241.3-201ENST00000611728 517 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC025574.2-201ENST00000615621 514 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 LINC00901.1-201ENST00000617252 152 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AL590410.1-201ENST00000617925 333 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC135068.5-201ENST00000624197 983 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 IFIT1P1-201ENST00000400497 1449 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC100778.3-201ENST00000580060 1750 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AL354854.1-201ENST00000455940 1363 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 MIR431-201ENST00000385266 114 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AC104297.1-201ENST00000393779 870 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 RPL5P19-201ENST00000404228 893 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AL157385.1-201ENST00000446973 268 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AL591473.1-201ENST00000464297 313 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AC092754.1-201ENST00000472975 479 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AC008410.1-201ENST00000483777 339 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 RN7SL193P-201ENST00000491708 276 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 NIFKP7-201ENST00000503365 834 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 RPS27AP18-201ENST00000515536 459 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AC113191.1-201ENST00000517759 403 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AC027281.1-201ENST00000574178 758 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 MIR4675-201ENST00000577898 77 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 NPM1P45-201ENST00000583151 559 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 WBP1LP12-201ENST00000604449 331 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AC012213.4-201ENST00000606457 354 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AL135786.2-201ENST00000608422 615 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 MIR6883-201ENST00000614952 78 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 BX005214.3-202ENST00000619809 325 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AC007603.3-201ENST00000636915 979 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AC126323.6-202ENST00000568092 3511 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 AC027290.2-201ENST00000623210 18662 ntBASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
KCNIP3Q9Y2W7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 SCARNA15-201ENST00000607520 4325 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 OR52B1P-201ENST00000316506 909 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 SNORA68.2-201ENST00000391263 128 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 RBBP4P5-201ENST00000398583 1266 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 RPS24P12-201ENST00000402084 394 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 RMRPP5-201ENST00000411156 267 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AL022324.2-201ENST00000434827 780 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 HMGB3P9-201ENST00000441799 583 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 PA2G4P1-201ENST00000442248 1197 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 C1DP3-201ENST00000455013 423 ntBASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.44□□□□□ -1.7
KCNIP3Q9Y2W7 RPL15P21-201ENST00000495592 567 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms