Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 MSL3P1-202ENST00000440028 1468 ntBASIC5.12□□□□□ -1.59
CHD7Q9P2D1 AC105342.1-201ENST00000378334 6848 ntBASIC5.12□□□□□ -1.59
CHD7Q9P2D1 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHD7Q9P2D1 TLK1P1-201ENST00000456760 2440 ntBASIC5.12□□□□□ -1.59
CHD7Q9P2D1 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.12□□□□□ -1.59
CHD7Q9P2D1 ARL4AP5-201ENST00000404372 599 ntBASIC5.12□□□□□ -1.59
CHD7Q9P2D1 SNORA11.2-201ENST00000408318 127 ntBASIC5.12□□□□□ -1.59
CHD7Q9P2D1 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.12□□□□□ -1.59
CHD7Q9P2D1 AC100847.1-201ENST00000611316 481 ntBASIC5.12□□□□□ -1.59
CHD7Q9P2D1 AC010632.3-201ENST00000611377 369 ntBASIC5.12□□□□□ -1.59
CHD7Q9P2D1 uc_338.7-201ENST00000621834 124 ntBASIC5.12□□□□□ -1.59
CHD7Q9P2D1 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CHD7Q9P2D1 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 AL590004.4-201ENST00000566733 7060 ntBASIC5.11□□□□□ -1.59
CHD7Q9P2D1 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 RPS29P17-201ENST00000430795 166 ntBASIC5.11□□□□□ -1.59
CHD7Q9P2D1 AC041039.1-201ENST00000485656 536 ntBASIC5.11□□□□□ -1.59
CHD7Q9P2D1 RPL7P41-201ENST00000485823 957 ntBASIC5.11□□□□□ -1.59
CHD7Q9P2D1 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 DSTNP2-201ENST00000504533 515 ntBASIC5.11□□□□□ -1.59
CHD7Q9P2D1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 RPL36AP41-201ENST00000493820 306 ntBASIC5.11□□□□□ -1.59
CHD7Q9P2D1 AC008958.1-201ENST00000511047 682 ntBASIC5.11□□□□□ -1.59
CHD7Q9P2D1 AC022360.1-201ENST00000521058 340 ntBASIC5.11□□□□□ -1.59
CHD7Q9P2D1 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 AL450345.1-202ENST00000605741 3881 ntBASIC5.11□□□□□ -1.59
CHD7Q9P2D1 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.11□□□□□ -1.59
CHD7Q9P2D1 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 RNU1-130P-201ENST00000363930 160 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 RPL23AP59-201ENST00000399415 461 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 RN7SL303P-201ENST00000469773 251 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 AC005412.2-201ENST00000492004 341 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 MIR492-201ENST00000638676 116 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 LRRC37BP1-201ENST00000398851 714 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 RN7SKP16-201ENST00000410180 299 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 NDUFB4P8-201ENST00000435351 367 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 AL390879.1-201ENST00000439143 386 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 NUTF2P3-201ENST00000448540 384 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 RN7SL810P-201ENST00000493031 276 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 IGLVIV-65-201ENST00000517313 360 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 AC025884.1-201ENST00000556034 378 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 RBPJP2-201ENST00000618187 1444 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 RPS3AP25-201ENST00000411660 793 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 RCC2P2-201ENST00000422174 918 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 IMPA1P1-201ENST00000510718 842 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 AC011477.5-201ENST00000586571 259 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 AC039056.2-201ENST00000622261 511 ntBASIC5.1□□□□□ -1.59
CHD7Q9P2D1 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHD7Q9P2D1 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms