Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 OR13C3-201ENST00000374781 1108 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 MIR105-1-201ENST00000385222 81 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 RNA5SP339-201ENST00000390987 122 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AL161722.2-201ENST00000434731 981 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 CLUHP1-201ENST00000435012 1190 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AC144530.1-201ENST00000452862 555 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AL133445.1-201ENST00000467051 452 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 RN7SL189P-201ENST00000468631 289 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 RPL12P24-201ENST00000474907 486 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 RN7SL547P-201ENST00000490793 290 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AC006427.1-201ENST00000514359 712 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 EIF4A2P5-201ENST00000529914 499 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AC018552.1-201ENST00000562099 811 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AC022884.2-201ENST00000578535 580 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AC127024.5-201ENST00000580085 462 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AC019072.1-201ENST00000604535 1551 ntBASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 RNA5SP223-201ENST00000365174 120 ntBASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 RNU1-77P-201ENST00000390868 162 ntBASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AL121878.1-201ENST00000418638 859 ntBASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AL133325.1-201ENST00000421090 382 ntBASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 CYCSP12-201ENST00000437729 300 ntBASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AL138787.1-202ENST00000437804 898 ntBASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 RN7SL717P-201ENST00000478343 297 ntBASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 MYL12BP2-201ENST00000503948 512 ntBASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 RPEP1-201ENST00000504507 658 ntBASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AC100784.1-201ENST00000522790 310 ntBASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AC020978.7-201ENST00000575953 1187 ntBASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 SNORD39.2-201ENST00000579995 76 ntBASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AC008814.1-201ENST00000603797 406 ntBASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AL589674.2-201ENST00000604304 337 ntBASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AL606537.1-201ENST00000607258 2011 ntBASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC40Q9H9A6 AL603750.1-201ENST00000624216 1717 ntBASIC5.34□□□□□ -1.56
LRRC40Q9H9A6 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LRRC40Q9H9A6 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
LRRC40Q9H9A6 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.34□□□□□ -1.56
LRRC40Q9H9A6 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 AC011755.1-201ENST00000623763 2049 ntBASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 HSPA8P14-201ENST00000552265 1805 ntBASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 AL353625.1-202ENST00000366273 571 ntBASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 AL390774.1-201ENST00000411924 246 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms