Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 RN7SKP186-201ENST00000365371 303 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 RPL7AP49-201ENST00000429522 581 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 BX323845.1-201ENST00000432417 179 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AL591438.1-201ENST00000433508 581 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 RPL19P16-201ENST00000433839 588 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 SUMO2P1-206ENST00000445436 284 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AC091685.2-201ENST00000454924 864 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 RPS3AP41-201ENST00000462701 778 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 GOLGA5P1-201ENST00000507317 980 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 IMPA1P1-201ENST00000510718 842 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AC005000.1-201ENST00000536192 288 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 BNIP3P35-201ENST00000604530 490 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AC087783.2-201ENST00000605070 562 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 FAM25E-202ENST00000608562 189 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 RNA5SP439-201ENST00000617595 124 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 MIR6839-201ENST00000620425 113 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AC087385.3-201ENST00000620477 187 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AC091905.4-201ENST00000623432 202 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 AC006210.2-201ENST00000367074 1545 ntBASIC5.57□□□□□ -1.52
NXF3Q9H4D5 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NXF3Q9H4D5 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.56□□□□□ -1.52
NXF3Q9H4D5 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 RN7SKP95-201ENST00000362860 303 ntBASIC5.56□□□□□ -1.52
NXF3Q9H4D5 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 RBMY2KP-201ENST00000418221 992 ntBASIC5.56□□□□□ -1.52
NXF3Q9H4D5 AC016772.1-201ENST00000444170 1261 ntBASIC5.56□□□□□ -1.52
NXF3Q9H4D5 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 RN7SL591P-201ENST00000496150 292 ntBASIC5.56□□□□□ -1.52
NXF3Q9H4D5 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 AC021193.1-201ENST00000511607 420 ntBASIC5.56□□□□□ -1.52
NXF3Q9H4D5 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 EIF4A2P5-201ENST00000529914 499 ntBASIC5.56□□□□□ -1.52
NXF3Q9H4D5 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 AC105254.2-201ENST00000603636 436 ntBASIC5.56□□□□□ -1.52
NXF3Q9H4D5 MEMO1P5-201ENST00000604810 406 ntBASIC5.56□□□□□ -1.52
NXF3Q9H4D5 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 AC100827.5-201ENST00000615883 426 ntBASIC5.56□□□□□ -1.52
NXF3Q9H4D5 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 AL138820.1-201ENST00000617901 5305 ntBASIC5.56□□□□□ -1.52
NXF3Q9H4D5 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
NXF3Q9H4D5 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 MIPEPP2-201ENST00000422560 1819 ntBASIC5.55□□□□□ -1.52
NXF3Q9H4D5 ICE2P1-201ENST00000512800 1849 ntBASIC5.55□□□□□ -1.52
NXF3Q9H4D5 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 NLRP3P1-201ENST00000622303 1785 ntBASIC5.55□□□□□ -1.52
NXF3Q9H4D5 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.55□□□□□ -1.52
NXF3Q9H4D5 RNA5SP428-201ENST00000365129 132 ntBASIC5.55□□□□□ -1.52
NXF3Q9H4D5 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms