Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 DDX39BP1-205ENST00000422507 192 ntBASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 RHOT1P3-201ENST00000436571 331 ntBASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 RN7SL329P-201ENST00000467740 299 ntBASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 AC105420.1-201ENST00000504389 582 ntBASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 RN7SKP260-201ENST00000516907 149 ntBASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 AC125494.2-201ENST00000602431 657 ntBASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 AC093799.2-201ENST00000610062 578 ntBASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 AL627230.1-201ENST00000613077 211 ntBASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 AL591926.8-201ENST00000616876 211 ntBASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 SCARNA15-201ENST00000607520 4325 ntBASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 AC083837.1-201ENST00000565297 2994 ntBASIC5.67□□□□□ -1.5
POLR3FQ9H1D9 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 NXF4-202ENST00000416098 1465 ntBASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 NPM1P22-201ENST00000427761 952 ntBASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 PSMD10P3-201ENST00000437000 448 ntBASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 RPL34P20-201ENST00000442771 351 ntBASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 NDUFA5P8-201ENST00000449019 346 ntBASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 RN7SL826P-201ENST00000479724 288 ntBASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 HMGN2P25-201ENST00000486956 268 ntBASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 AC090286.3-201ENST00000573133 187 ntBASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 CASC19-222ENST00000641321 1173 ntBASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
POLR3FQ9H1D9 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 AL589647.1-201ENST00000402485 466 ntBASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 AL390316.1-201ENST00000406279 553 ntBASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 RBMY2QP-201ENST00000429799 1147 ntBASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 BX323845.1-201ENST00000432417 179 ntBASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 BX842559.2-201ENST00000451418 605 ntBASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 RN7SL610P-201ENST00000463845 291 ntBASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 RN7SL443P-201ENST00000464331 290 ntBASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 AC097486.1-201ENST00000515331 210 ntBASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 MIR4691-201ENST00000583764 85 ntBASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.65□□□□□ -1.5
POLR3FQ9H1D9 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
POLR3FQ9H1D9 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.65□□□□□ -1.51
POLR3FQ9H1D9 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
POLR3FQ9H1D9 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 578.5 ms