Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 LSM1P2-201ENST00000604911 322 ntBASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 AC011374.2-201ENST00000607135 526 ntBASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 AC245014.3-201ENST00000618589 347 ntBASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 AC048341.3-201ENST00000619323 491 ntBASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 AC111152.1-202ENST00000635848 339 ntBASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 AC119674.1-212ENST00000641155 993 ntBASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 CR788268.1-201ENST00000603931 1809 ntBASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 AC130304.1-201ENST00000622942 2385 ntBASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 AC093225.1-201ENST00000506867 1408 ntBASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 AC087516.1-201ENST00000561236 2428 ntBASIC5.82□□□□□ -1.48
TRIM54Q9BYV2 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AL161756.3-201ENST00000641216 2071 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC140134.1-201ENST00000511830 3544 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 RN7SKP74-201ENST00000362849 309 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 RNU6-244P-201ENST00000391028 104 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 RNU6-932P-201ENST00000391108 106 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AL663074.2-201ENST00000440621 479 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 RPS7P3-201ENST00000443360 580 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 SEPT14P24-201ENST00000447236 180 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC118758.1-202ENST00000454719 225 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC117394.1-201ENST00000477323 567 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 RN7SL284P-201ENST00000498823 275 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC093815.1-201ENST00000508637 280 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC138866.2-201ENST00000508650 584 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 HMGB1P1-201ENST00000522557 636 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AL845552.1-201ENST00000556820 323 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 MTND3P12-201ENST00000559068 328 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC002310.3-201ENST00000569728 723 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC006115.2-201ENST00000596823 202 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AL365400.2-201ENST00000605604 902 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AL135786.2-201ENST00000608422 615 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC096708.4-201ENST00000620563 552 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC104985.3-201ENST00000623479 597 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC011815.3-201ENST00000624194 473 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC139713.2-210ENST00000641741 992 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 CDC27P2-201ENST00000425026 1922 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AC099786.3-201ENST00000565735 1410 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 AL138820.1-201ENST00000617901 5305 ntBASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM54Q9BYV2 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AC017007.4-201ENST00000503353 1352 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 PPBPP2-201ENST00000513150 1362 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 QRSL1P1-201ENST00000400977 1540 ntBASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TRIM54Q9BYV2 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms