Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 RMST-209ENST00000639542 3269 ntTSL 5 BASIC7.25□□□□□ -1.25
CHMP4AQ9BY43 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CHMP4AQ9BY43 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CHMP4AQ9BY43 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
CHMP4AQ9BY43 LINC01109-201ENST00000603837 3081 ntBASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 RN7SKP124-201ENST00000364730 341 ntBASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 MIR421-201ENST00000365696 85 ntBASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 OR3A2-201ENST00000408891 1076 ntBASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 RNU6-603P-201ENST00000411403 107 ntBASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 AL133173.1-201ENST00000423458 397 ntBASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 TMEM183AP1-205ENST00000432739 290 ntBASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 RPL12P46-201ENST00000436610 195 ntBASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 AC139697.1-201ENST00000548429 745 ntBASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 AC007225.2-201ENST00000562529 256 ntBASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 OR5AC4P-202ENST00000642086 985 ntBASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 AL138820.1-201ENST00000617901 5305 ntBASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 MRE11P1-201ENST00000464884 2127 ntBASIC7.24□□□□□ -1.25
CHMP4AQ9BY43 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 RNA5SP242-201ENST00000364171 118 ntBASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 RNA5SP132-201ENST00000364725 118 ntBASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 RN7SKP6-201ENST00000364795 319 ntBASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AL009179.1-201ENST00000406085 265 ntBASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AL513325.1-201ENST00000417716 1034 ntBASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AC048351.1-201ENST00000420064 602 ntBASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 FMO7P-201ENST00000436045 768 ntBASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 SPRYD7P1-201ENST00000443861 570 ntBASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AL596266.1-201ENST00000448132 400 ntBASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 RN7SL583P-201ENST00000475692 287 ntBASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 RNU6-751P-201ENST00000516382 101 ntBASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AC107918.3-201ENST00000533272 382 ntBASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AC027544.3-201ENST00000535082 757 ntBASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 VN1R84P-201ENST00000593697 235 ntBASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AL133247.2-201ENST00000603236 482 ntBASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 AC004477.3-201ENST00000614061 590 ntBASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 OR51C1P-202ENST00000641159 1444 ntBASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CHMP4AQ9BY43 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 DDX18P4-201ENST00000511690 1966 ntBASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 MAPK10-304ENST00000641341 3984 ntBASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 EIF4A1P3-201ENST00000411521 244 ntBASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 RPS6P23-201ENST00000413224 722 ntBASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 OR6E1P-201ENST00000414424 923 ntBASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 OR10T1P-201ENST00000424327 947 ntBASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 MRPS33P4-201ENST00000434892 317 ntBASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 AC006335.2-201ENST00000437993 330 ntBASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 NANOGP9-201ENST00000439890 892 ntBASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 PSAT1P4-201ENST00000466500 526 ntBASIC7.22□□□□□ -1.25
CHMP4AQ9BY43 EIF1P7-201ENST00000487533 337 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms