Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 UBA52P3-201ENST00000491303 382 ntBASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 DUTP1-201ENST00000493631 470 ntBASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 HMGB3P14-201ENST00000494195 599 ntBASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AC114781.3-201ENST00000512083 142 ntBASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 RNU6-513P-201ENST00000516104 104 ntBASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AC068305.2-201ENST00000550567 1205 ntBASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AC068020.1-201ENST00000594215 661 ntBASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 COX6CP7-201ENST00000597056 208 ntBASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AC130352.1-201ENST00000602979 661 ntBASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AL139124.1-201ENST00000609123 421 ntBASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AL035661.1-201ENST00000620459 1144 ntBASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.45□□□□□ -1.7
CHRDL1Q9BU40 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 AC011155.1-201ENST00000316512 456 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 RNU6-304P-201ENST00000364855 107 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 SUGT1P2-201ENST00000379452 992 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 MIR130A-201ENST00000385274 89 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 NIFKP3-201ENST00000417799 865 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 RPS20P1-201ENST00000434853 354 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 RPL12P46-201ENST00000436610 195 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 LINC02210-201ENST00000444561 288 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 APOOP2-201ENST00000461561 539 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 NDUFA5P5-201ENST00000468361 342 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 RPS7P6-201ENST00000485777 579 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 NIP7P2-201ENST00000485801 544 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 HMGN2P36-201ENST00000529541 409 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 AC096996.1-201ENST00000563813 325 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 NDUFA5P11-201ENST00000567995 343 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 AL138895.2-201ENST00000603019 178 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 RPL23AP61-201ENST00000623642 466 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 AC019080.5-201ENST00000624891 757 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 AC022919.1-201ENST00000624979 626 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 KARSP1-201ENST00000451871 1752 ntBASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CHRDL1Q9BU40 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms